G1139746


Basic Information

Item Value
gene id G1139746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5669870 ~ 5671286 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299314
gatgataatgatgatgaagatgatgatagtgattatggtgatgatggtgataatgatgatggtgataattgtgatggtgatgatggtgataattgtgatggtgatgatggtaatgatgatagtgatgatgatgatgatcacctcATGATACCTACACCCGAAATGATGATGAAGGCTCCTCCCTGTCTCTTATCTCTTGGTCATCACAAGCTGGTCTCCCTCTCATGTTCTGTTTAAATACGTGATCCATTTTCACATCATCTGTGTATCTTTTCTCTCCCCATCCGTCTCTAATCCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTATTCCCCCTGTGTGTCTTTCCTCTCCCCATCCGTCTCTATTCCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTATTCCCCCTGTGTGTCTTTCCTCTCCCCATCCGTCTCTATTCCCCCTGTGTGTCTTTCCTCTCCCCATCCGTCTCTATTCCCCCTGTGTGTCTTTTCTCTCCCCATTCGTCTCTATTCCCCCTGTGTGTCTttcctctccccatctgtctctaTTCCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTATTGCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTATTCCCCCTGTGTGTCTTTTCTCTCCCCATTCGTCTCTATTCCCCCTGTGTGTCTTTCCTCTCCCCATCCGTCTCTATTGCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTGTTCCCCCTGTGTATCTTTTCTCTCCCCATCCGTCTCTGTTCCCCCTGTGTGTCTttcctctccccatctgtctctaTTCCCCCTGTGTGTCTttcctctccccatctgtctctaTTCCCCCTGTGTGTCttttctctccccatctgtctctaATCCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTATTCCCCCTGTGTGTCTttcctctccccatctgtctctaTTCCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTATTCGCCCTGTGTGTCTttcctctccccatctgtctctaTTCCCCCTGTGTGTCTTTTCTCTCCCCATCCGTCTCTATTCGCCCTGTGTATCTTTCCTCTCATTGGTGTTAAATCATCTGGAACCAGTTGTTTAACCATTAACTACAGTCGCAAAATTTACTTTCCCCAAATTTATACGATTTTCAGAAATCCCGTTTGGAAGATTTCTGGAATCCTGACGGAATGGGCCTGCCTTGGCAGGGAATCCTGACGGAATGGGCCTGCCTTGGCAGGGAATCCTGACGGAATGGGCCTGCCTTAGCAGGGAATCCTGAATTCTCCAACTGGGGTTTTCTGTAAAACTGTGGGAAAGTTACGTGAATTTTGCAACCGTAATCCATCAACAGAGTTTTTTataattga

Function

NR:

description
trans-Golgi network integral membrane protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299314 True 1417 lncRNA 0.48 1 5669870 5671286

Neighbor

gene id symbol gene type direction distance location
LOC110516670 LOC106592431 coding downstream 40024 5626611 ~ 5629846 (-)
LOC110517601 tmed1 coding downstream 74310 5585054 ~ 5595560 (-)
LOC110485445 LOC106564237 coding downstream 389007 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 403383 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 425429 5216411 ~ 5244441 (-)
LOC118938515 LOC106592948 coding upstream 151 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 7878 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 85447 5756733 ~ 5783389 (-)
nxnl1 LOC106592756 coding upstream 123023 5794309 ~ 5799274 (-)
LOC110519495 LOC106566240 coding upstream 157114 5828400 ~ 6076863 (-)
G1139748 NA non-coding downstream 509 5669084 ~ 5669361 (-)
G1139736 NA non-coding downstream 1025 5668002 ~ 5668845 (-)
G1139740 NA non-coding downstream 2136 5667319 ~ 5667734 (-)
G1139798 NA non-coding downstream 4529 5665016 ~ 5665341 (-)
G1139797 NA non-coding downstream 5342 5661404 ~ 5664528 (-)
G1139818 NA non-coding upstream 74388 5745674 ~ 5747167 (-)
G1139823 NA non-coding upstream 95951 5767237 ~ 5767977 (-)
G1139829 NA non-coding upstream 131369 5802655 ~ 5802866 (-)
G1139840 NA non-coding upstream 151754 5823040 ~ 5824694 (-)
G1138553 LOC106592646 other downstream 407357 5201055 ~ 5262513 (-)
G1138568 NA other downstream 506916 5158165 ~ 5162954 (-)
G1138232 NA other downstream 1050006 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 1248610 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 373571 6044857 ~ 6058622 (-)
G1139916 NA other upstream 421073 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 935033 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1027096 6698319 ~ 6717102 (-)

Expression


Co-expression Network