Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139818 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5745674 ~ 5747167 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1299398 | True | 255 | lncRNA | 0.46 | 2 | 5745674 | 5747167 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938515 | LOC106592948 | coding | downstream | 67201 | 5671437 ~ 5678473 (-) |
| LOC110516670 | LOC106592431 | coding | downstream | 115828 | 5626611 ~ 5629846 (-) |
| LOC110517601 | tmed1 | coding | downstream | 150114 | 5585054 ~ 5595560 (-) |
| LOC110485445 | LOC106564237 | coding | downstream | 464811 | 5278946 ~ 5280863 (-) |
| LOC110516762 | LOC106592646 | coding | downstream | 479187 | 5245446 ~ 5266487 (-) |
| LOC110485432 | LOC106593320 | coding | upstream | 9566 | 5756733 ~ 5783389 (-) |
| nxnl1 | LOC106592756 | coding | upstream | 47142 | 5794309 ~ 5799274 (-) |
| LOC110519495 | LOC106566240 | coding | upstream | 81233 | 5828400 ~ 6076863 (-) |
| LOC110516892 | LOC106585402 | coding | upstream | 265992 | 6013159 ~ 6033506 (-) |
| LOC110512397 | LOC106592307 | coding | upstream | 287191 | 6034358 ~ 6132682 (-) |
| G1139746 | NA | non-coding | downstream | 74388 | 5669870 ~ 5671286 (-) |
| G1139748 | NA | non-coding | downstream | 76313 | 5669084 ~ 5669361 (-) |
| G1139736 | NA | non-coding | downstream | 76829 | 5668002 ~ 5668845 (-) |
| G1139740 | NA | non-coding | downstream | 77940 | 5667319 ~ 5667734 (-) |
| G1139798 | NA | non-coding | downstream | 80333 | 5665016 ~ 5665341 (-) |
| LOC110487505 | LOC106593267 | non-coding | upstream | 8651 | 5679164 ~ 5756340 (-) |
| G1139823 | NA | non-coding | upstream | 20070 | 5767237 ~ 5767977 (-) |
| G1139829 | NA | non-coding | upstream | 55488 | 5802655 ~ 5802866 (-) |
| G1139840 | NA | non-coding | upstream | 75873 | 5823040 ~ 5824694 (-) |
| G1139846 | NA | non-coding | upstream | 136098 | 5883265 ~ 6013720 (-) |
| G1138553 | LOC106592646 | other | downstream | 483161 | 5201055 ~ 5262513 (-) |
| LOC118936520 | NA | other | downstream | 501270 | 5216411 ~ 5244441 (-) |
| G1138568 | NA | other | downstream | 582720 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 1125810 | 4619495 ~ 4620179 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 297690 | 6044857 ~ 6058622 (-) |
| G1139916 | NA | other | upstream | 345192 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 859152 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 951215 | 6698319 ~ 6717102 (-) |
| LOC110510388 | LOC106592846 | other | upstream | 1032081 | 6779248 ~ 6831814 (-) |
