Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139829 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5802655 ~ 5802866 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1299410 | True | 212 | lncRNA | 0.37 | 1 | 5802655 | 5802866 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nxnl1 | LOC106592756 | coding | downstream | 3381 | 5794309 ~ 5799274 (-) |
| LOC110485432 | LOC106593320 | coding | downstream | 19266 | 5756733 ~ 5783389 (-) |
| LOC110487505 | LOC106593267 | coding | downstream | 46836 | 5679164 ~ 5756340 (-) |
| LOC118938515 | LOC106592948 | coding | downstream | 124182 | 5671437 ~ 5678473 (-) |
| LOC110516670 | LOC106592431 | coding | downstream | 172809 | 5626611 ~ 5629846 (-) |
| LOC110519495 | LOC106566240 | coding | upstream | 25534 | 5828400 ~ 6076863 (-) |
| LOC110516892 | LOC106585402 | coding | upstream | 210293 | 6013159 ~ 6033506 (-) |
| LOC110512397 | LOC106592307 | coding | upstream | 231492 | 6034358 ~ 6132682 (-) |
| LOC110512654 | LOC106592307 | coding | upstream | 242930 | 6044857 ~ 6058622 (-) |
| LOC110512959 | LOC106592278 | coding | upstream | 349331 | 6152197 ~ 6167475 (-) |
| G1139823 | NA | non-coding | downstream | 34678 | 5767237 ~ 5767977 (-) |
| G1139818 | NA | non-coding | downstream | 55488 | 5745674 ~ 5747167 (-) |
| G1139746 | NA | non-coding | downstream | 131369 | 5669870 ~ 5671286 (-) |
| G1139748 | NA | non-coding | downstream | 133294 | 5669084 ~ 5669361 (-) |
| G1139840 | NA | non-coding | upstream | 20174 | 5823040 ~ 5824694 (-) |
| G1139846 | NA | non-coding | upstream | 80399 | 5883265 ~ 6013720 (-) |
| G1139887 | NA | non-coding | upstream | 165847 | 5968713 ~ 6017737 (-) |
| G1139888 | NA | non-coding | upstream | 166951 | 5969817 ~ 6019166 (-) |
| G1139890 | NA | non-coding | upstream | 192375 | 5995241 ~ 5996066 (-) |
| G1138553 | LOC106592646 | other | downstream | 540142 | 5201055 ~ 5262513 (-) |
| LOC118936520 | NA | other | downstream | 558251 | 5216411 ~ 5244441 (-) |
| G1138568 | NA | other | downstream | 639701 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 1182791 | 4619495 ~ 4620179 (-) |
| G1139916 | NA | other | upstream | 289493 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 803453 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 895516 | 6698319 ~ 6717102 (-) |
| LOC110510388 | LOC106592846 | other | upstream | 976382 | 6779248 ~ 6831814 (-) |
