Item | Value |
---|---|
gene id | G1138908 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 5885765 ~ 6092048 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
adhesion G protein-coupled receptor E1-like |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1298164 | False | 2949 | lncRNA | 0.39 | 7 | 5885765 | 6024172 |
TU1298165 | False | 2778 | lncRNA | 0.39 | 7 | 5885765 | 6024680 |
TU1298166 | False | 3693 | lncRNA | 0.40 | 11 | 5885765 | 6033760 |
TU1298171 | False | 897 | lncRNA | 0.45 | 5 | 6025327 | 6049008 |
TU1298162 | True | 1244 | TUCP | 0.45 | 3 | 6027943 | 6092048 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110485428 | LOC106564224 | coding | upstream | 61218 | 5809607 ~ 5824547 (+) |
LOC110512914 | LOC106592432 | coding | upstream | 224464 | 5650220 ~ 5661301 (+) |
LOC118938165 | LOC106564215 | coding | upstream | 269231 | 5600164 ~ 5616534 (+) |
LOC110519517 | LOC106564209 | coding | upstream | 330848 | 5484170 ~ 5556011 (+) |
LOC118938164 | LOC106592549 | coding | upstream | 428700 | 5433810 ~ 5457065 (+) |
LOC110513590 | NA | coding | downstream | 131362 | 6179347 ~ 6185375 (+) |
LOC110485388 | LOC106592846 | coding | downstream | 287881 | 6336889 ~ 6375515 (+) |
LOC110485395 | LOC106592812 | coding | downstream | 340446 | 6389454 ~ 6411198 (+) |
LOC110485399 | LOC106594696 | coding | downstream | 370221 | 6419229 ~ 6428264 (+) |
LOC118938168 | NA | coding | downstream | 373505 | 6422513 ~ 6424344 (+) |
G1138882 | NA | non-coding | upstream | 17073 | 5811364 ~ 5868692 (+) |
G1138887 | NA | non-coding | upstream | 54421 | 5827732 ~ 5831344 (+) |
G1138872 | NA | non-coding | upstream | 82854 | 5802649 ~ 5802911 (+) |
G1138866 | NA | non-coding | upstream | 83851 | 5782434 ~ 5801914 (+) |
G1138863 | NA | non-coding | upstream | 129423 | 5756121 ~ 5756342 (+) |
G1138948 | NA | non-coding | downstream | 323 | 6049331 ~ 6049890 (+) |
G1138954 | NA | non-coding | downstream | 16896 | 6065904 ~ 6066728 (+) |
G1138957 | NA | non-coding | downstream | 19920 | 6068928 ~ 6072791 (+) |
G1138959 | NA | non-coding | downstream | 22332 | 6071340 ~ 6072270 (+) |
G1138967 | LOC106593046 | non-coding | downstream | 45585 | 6094593 ~ 6095334 (+) |
G1138894 | NA | other | upstream | 44541 | 5839853 ~ 5841224 (+) |
G1138780 | NA | other | upstream | 333511 | 5551896 ~ 5552254 (+) |
G1138769 | NA | other | upstream | 354653 | 5530389 ~ 5531112 (+) |
G1138668 | NA | other | upstream | 528637 | 5356470 ~ 5357364 (+) |
LOC110517645 | cssa12h10orf76 | other | downstream | 1098691 | 7147638 ~ 7210032 (+) |
G1139553 | NA | other | downstream | 1426366 | 7475374 ~ 7502281 (+) |
G1139317 | NA | other | downstream | 1476584 | 7525592 ~ 7527157 (+) |
G1138946 | NA | non-coding | upstream | 6644 | 6019697 ~ 6021299 (+) |
G1138944 | NA | non-coding | upstream | 9219 | 6017817 ~ 6018724 (+) |
G1138909 | NA | non-coding | upstream | 13220 | 5878360 ~ 6014723 (+) |
G1138938 | NA | non-coding | upstream | 31880 | 5995307 ~ 5996063 (+) |
G1138972 | NA | non-coding | downstream | 8893 | 6100941 ~ 6101474 (+) |
G1138986 | NA | non-coding | downstream | 56087 | 6148135 ~ 6149837 (+) |
G1138903 | NA | non-coding | downstream | 70696 | 6162744 ~ 6166857 (+) |
G1138993 | NA | non-coding | downstream | 81645 | 6173693 ~ 6174060 (+) |