Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139888 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5969817 ~ 6019166 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1299495 | True | 350 | lncRNA | 0.41 | 3 | 5969817 | 6019166 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nxnl1 | LOC106592756 | coding | downstream | 170543 | 5794309 ~ 5799274 (-) |
| LOC110485432 | LOC106593320 | coding | downstream | 186428 | 5756733 ~ 5783389 (-) |
| LOC110487505 | LOC106593267 | coding | downstream | 213998 | 5679164 ~ 5756340 (-) |
| LOC118938515 | LOC106592948 | coding | downstream | 291344 | 5671437 ~ 5678473 (-) |
| LOC110516670 | LOC106592431 | coding | downstream | 339971 | 5626611 ~ 5629846 (-) |
| LOC110512397 | LOC106592307 | coding | upstream | 15192 | 6034358 ~ 6132682 (-) |
| LOC110512654 | LOC106592307 | coding | upstream | 26630 | 6044857 ~ 6058622 (-) |
| LOC110512959 | LOC106592278 | coding | upstream | 133031 | 6152197 ~ 6167475 (-) |
| LOC118938167 | LOC106564205 | coding | upstream | 154678 | 6173844 ~ 6177005 (-) |
| LOC118938516 | NA | coding | upstream | 168892 | 6188058 ~ 6191695 (-) |
| G1139840 | NA | non-coding | downstream | 145123 | 5823040 ~ 5824694 (-) |
| G1139829 | NA | non-coding | downstream | 166951 | 5802655 ~ 5802866 (-) |
| G1139823 | NA | non-coding | downstream | 201840 | 5767237 ~ 5767977 (-) |
| G1139818 | NA | non-coding | downstream | 222650 | 5745674 ~ 5747167 (-) |
| G1139905 | NA | non-coding | upstream | 37700 | 6056866 ~ 6101418 (-) |
| G1139911 | NA | non-coding | upstream | 49197 | 6068363 ~ 6072303 (-) |
| G1139913 | NA | non-coding | upstream | 64318 | 6083484 ~ 6085105 (-) |
| G1138553 | LOC106592646 | other | downstream | 707304 | 5201055 ~ 5262513 (-) |
| LOC118936520 | NA | other | downstream | 725413 | 5216411 ~ 5244441 (-) |
| G1138568 | NA | other | downstream | 806863 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 1349953 | 4619495 ~ 4620179 (-) |
| G1139916 | NA | other | upstream | 73193 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 587153 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 679216 | 6698319 ~ 6717102 (-) |
| LOC110510388 | LOC106592846 | other | upstream | 760082 | 6779248 ~ 6831814 (-) |
