G1139911


Basic Information

Item Value
gene id G1139911
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 6068363 ~ 6072303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299530
ccataacacaactacctgaacatagaactatatccataacataactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactatatccataacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaatatagaactacatccataacatccataacacaactacctgaacatagaactatatccataacataactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatattactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatctataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagaactacatccataacataactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatattactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatctataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagaactacatccataacataactacctgaacatagaactacatccataacataactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatctataacatctataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagaactacatccataacataactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacataactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacataactacctgaacatagtactacatccataacataactacctgaacatagtactacatccataacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacatccataacataactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacatccataacatccataacataactacctgaacatagcactacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatagtactacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagaactacatccataacacaactacctgaccATAGTACTACATCtataacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagtactacatccataacatccataacacaactacctgaacatagtactacatccataacatccataacataactacctgaacatagtactacatccataacacaactacctgaacatagaactacatccataacatccataacacaactacctgaacatagtactacatccataacataactacctgaacatagtactacatccataacataactacctgaacatagctTAAATACAGTAACACCTAACTTAACATAGTAACTTCGAGCATAACAAACCGTAGTAGCTGACAGATATTAATACAAACTGTCTTTAAAGACATACGGAGGCTTCAGAAAGTATCTCAACCCATTACTTTCTTTCTCCTCATTTCgttgtgttacagactacatTATAGATGTATTCCTGTagatgttgtgttac

Function

NR:

description
PREDICTED: putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299530 True 3644 lncRNA 0.35 3 6068363 6072303

Neighbor

gene id symbol gene type direction distance location
LOC110512654 LOC106592307 coding downstream 9741 6044857 ~ 6058622 (-)
LOC110516892 LOC106585402 coding downstream 34857 6013159 ~ 6033506 (-)
nxnl1 LOC106592756 coding downstream 269089 5794309 ~ 5799274 (-)
LOC110485432 LOC106593320 coding downstream 284974 5756733 ~ 5783389 (-)
LOC110487505 LOC106593267 coding downstream 312544 5679164 ~ 5756340 (-)
LOC110512959 LOC106592278 coding upstream 79894 6152197 ~ 6167475 (-)
LOC118938167 LOC106564205 coding upstream 101541 6173844 ~ 6177005 (-)
LOC118938516 NA coding upstream 115755 6188058 ~ 6191695 (-)
LOC118938166 LOC106592843 coding upstream 131668 6203971 ~ 6244613 (-)
LOC110519908 LOC106592827 coding upstream 176607 6248910 ~ 6306407 (-)
G1139888 NA non-coding downstream 49197 5969817 ~ 6019166 (-)
G1139887 NA non-coding downstream 50626 5968713 ~ 6017737 (-)
G1139846 NA non-coding downstream 54643 5883265 ~ 6013720 (-)
LOC110512397 LOC106592307 non-coding upstream 7595 6034358 ~ 6132682 (-)
G1139913 NA non-coding upstream 11181 6083484 ~ 6085105 (-)
G1139898 NA non-coding upstream 56727 6129030 ~ 6131208 (-)
G1139747 NA non-coding upstream 79284 6151587 ~ 6234823 (-)
G1139981 NA non-coding upstream 216268 6288571 ~ 6302416 (-)
LOC118938515 LOC106592948 other downstream 396116 5671437 ~ 5678473 (-)
G1138553 LOC106592646 other downstream 805850 5201055 ~ 5262513 (-)
LOC118936520 NA other downstream 823959 5216411 ~ 5244441 (-)
G1138568 NA other downstream 905409 5158165 ~ 5162954 (-)
G1139916 NA other upstream 20056 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 534016 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 626079 6698319 ~ 6717102 (-)
LOC110510388 LOC106592846 other upstream 706945 6779248 ~ 6831814 (-)
LOC110494877 LOC106564203 other upstream 773107 6842471 ~ 6853303 (-)

Expression


Co-expression Network