Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139747 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 6151587 ~ 6234823 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1299315 | True | 286 | lncRNA | 0.37 | 3 | 6151587 | 6234823 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512397 | LOC106592307 | coding | downstream | 18905 | 6034358 ~ 6132682 (-) |
| LOC110519495 | LOC106566240 | coding | downstream | 74724 | 5828400 ~ 6076863 (-) |
| LOC110512654 | LOC106592307 | coding | downstream | 92965 | 6044857 ~ 6058622 (-) |
| LOC110516892 | LOC106585402 | coding | downstream | 118081 | 6013159 ~ 6033506 (-) |
| nxnl1 | LOC106592756 | coding | downstream | 352313 | 5794309 ~ 5799274 (-) |
| LOC110519908 | LOC106592827 | coding | upstream | 14087 | 6248910 ~ 6306407 (-) |
| LOC110485390 | LOC106594684 | coding | upstream | 194299 | 6429122 ~ 6450055 (-) |
| LOC110487211 | LOC106564193 | coding | upstream | 235650 | 6470473 ~ 6508696 (-) |
| LOC110485423 | LOC106592905 | coding | upstream | 310428 | 6545251 ~ 6584693 (-) |
| LOC118938537 | NA | coding | upstream | 357123 | 6591946 ~ 6593147 (-) |
| G1139898 | NA | non-coding | downstream | 20379 | 6129030 ~ 6131208 (-) |
| G1139905 | NA | non-coding | downstream | 50169 | 6056866 ~ 6101418 (-) |
| G1139913 | NA | non-coding | downstream | 66482 | 6083484 ~ 6085105 (-) |
| G1139911 | NA | non-coding | downstream | 79284 | 6068363 ~ 6072303 (-) |
| G1139981 | NA | non-coding | upstream | 53748 | 6288571 ~ 6302416 (-) |
| G1139994 | NA | non-coding | upstream | 81848 | 6316671 ~ 6317016 (-) |
| G1140000 | NA | non-coding | upstream | 88704 | 6323527 ~ 6323756 (-) |
| G1140021 | NA | non-coding | upstream | 140992 | 6375815 ~ 6376564 (-) |
| G1140024 | NA | non-coding | upstream | 148821 | 6383644 ~ 6383868 (-) |
| G1139916 | NA | other | downstream | 58071 | 6092359 ~ 6093516 (-) |
| LOC118938515 | LOC106592948 | other | downstream | 479340 | 5671437 ~ 5678473 (-) |
| G1138553 | LOC106592646 | other | downstream | 889074 | 5201055 ~ 5262513 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 371496 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 463559 | 6698319 ~ 6717102 (-) |
| LOC110510388 | LOC106592846 | other | upstream | 544425 | 6779248 ~ 6831814 (-) |
| LOC110494877 | LOC106564203 | other | upstream | 610587 | 6842471 ~ 6853303 (-) |
| G1140208 | LOC106598633 | other | upstream | 684906 | 6919729 ~ 6952206 (-) |
