G1140021


Basic Information

Item Value
gene id G1140021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 6375815 ~ 6376564 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299666
GGCCTGTGGCACCAGTACCAGCAGGCCCCGCCCAGGTCCAGCCTCATTGGCCTGCAGCTCCTACTGCTGTTGTCCGTCCATCTGTCCGTGAAGATCAACCAGACTTGATATAATCAAATCAGCGGCTTCCAAATAAACATTTAATGAAAAGTATCTTAAAGGAGCAATCTGTGATTTAGTAGAGCTGGGAATTTCCAGGGACCTTACAATACAATACTtcggtgccgatacgatatgtattgcgacaaaaatataaatgcaacatggaaAATGTTGgtaacatgtttcatgagctaaaacaAAAGAACATCACACAtttgtttacgtccctgttagtgagcatttctcgttTGACAAGGTAATCCATCCATGTGACAGGTTTggcttatcaagaagctgattaaacagcatcattacacaggtgcaccttgtgctggggacaaaaggctactctaaaatgtgcagttttgacacACATTACAGATGTCAAGTTTTGTGGGTGCGTGCAAGTGGTCTGCTGaccgcaggaatgtccaacagagcatTTTATGATTGTTTCTCGGCCATAAGCTAACTCcaaagtcgttttagagaatttggcagtacatccaaccggcctcacaatcgcTGACGaagtgtaaccatgccagcccagggcCTCTACATCCGGTTtcatcgtctgagaccagccatccggacagctgaGGAAACTGAT

Function

NR:

description
hypothetical protein EH28_23780

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299666 True 715 lncRNA 0.45 2 6375815 6376564

Neighbor

gene id symbol gene type direction distance location
LOC110519908 LOC106592827 coding downstream 69408 6248910 ~ 6306407 (-)
LOC118938166 LOC106592843 coding downstream 131202 6203971 ~ 6244613 (-)
LOC118938516 NA coding downstream 184120 6188058 ~ 6191695 (-)
LOC118938167 LOC106564205 coding downstream 198810 6173844 ~ 6177005 (-)
LOC110512959 LOC106592278 coding downstream 208340 6152197 ~ 6167475 (-)
LOC110485390 LOC106594684 coding upstream 52558 6429122 ~ 6450055 (-)
LOC110487211 LOC106564193 coding upstream 93909 6470473 ~ 6508696 (-)
LOC110485423 LOC106592905 coding upstream 168687 6545251 ~ 6584693 (-)
LOC118938537 NA coding upstream 215382 6591946 ~ 6593147 (-)
LOC110485426 LOC106594040 coding upstream 223577 6600141 ~ 6649233 (-)
G1140000 NA non-coding downstream 52059 6323527 ~ 6323756 (-)
G1139994 NA non-coding downstream 58799 6316671 ~ 6317016 (-)
G1139981 NA non-coding downstream 73399 6288571 ~ 6302416 (-)
G1139747 NA non-coding downstream 140992 6151587 ~ 6234823 (-)
G1139898 NA non-coding downstream 244607 6129030 ~ 6131208 (-)
G1140024 NA non-coding upstream 7080 6383644 ~ 6383868 (-)
G1140025 NA non-coding upstream 7364 6383928 ~ 6384550 (-)
G1140026 NA non-coding upstream 9991 6386555 ~ 6388686 (-)
G1140057 NA non-coding upstream 38340 6414904 ~ 6416279 (-)
G1140058 NA non-coding upstream 39775 6416339 ~ 6416727 (-)
G1139916 NA other downstream 282299 6092359 ~ 6093516 (-)
LOC110512654 LOC106592307 other downstream 326875 6044857 ~ 6058622 (-)
LOC118938515 LOC106592948 other downstream 703568 5671437 ~ 5678473 (-)
G1138553 LOC106592646 other downstream 1113302 5201055 ~ 5262513 (-)
LOC118938170 LOC106564207 other upstream 321818 6698319 ~ 6717102 (-)
LOC110510388 LOC106592846 other upstream 402684 6779248 ~ 6831814 (-)
LOC110494877 LOC106564203 other upstream 468846 6842471 ~ 6853303 (-)
G1140208 LOC106598633 other upstream 543165 6919729 ~ 6952206 (-)

Expression


Co-expression Network