G1140057


Basic Information

Item Value
gene id G1140057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 6414904 ~ 6416279 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299712
cagtttagattaccagtgtcttcttctgtggtaggttaaaggtgacggtttagattaccagtgtcttcttcagtggtaggttaaaggtgacggtttagattaccagtgtcttcttctgtggtaggttaaaggtgacggtttagattaccagtgtcttcttctgtggtaggttaaaggtgacagtttagattaccagtgtcttcttctgtggtaggttaaaggtgacagtttagattaccagtgtcttcttctgtggtaggttaaaggtgacagtttagattaccagtgtcttcttcagtggtaggttaaaggtgacggtttagattaccagtgtcttcttctgtggtaggttaaaggtgacagtttagattaccagtgtcttcttctgtggtaggttaatggtgacagtttagattaccagtgtcttcttctgtggtaggttaatggtgacagtttagattaccagtgtcttcttctgtggtaggttaatggtgacagtttagattaccagtgtcttcttctgtggtaggttaatggtgacagtttagattaccagtgtcttcttctgtggtaggttaatggtgacagtttagattaccagtgtcttcttctgtggtaggttaatggtgacagtttagattaccagtgtcttcttctgtggtaggttaaaggtgacagtttagattaccagtgtcttcttctgtggtaggttaaaggtgacagtttagattaccagtgtcttcttctgtggtaggttaaaggtgacagtttagattaccagtgtcttcttc

Function

NR:

description
uncharacterized protein LOC110497064

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299712 True 791 lncRNA 0.40 3 6414904 6416279

Neighbor

gene id symbol gene type direction distance location
LOC110519908 LOC106592827 coding downstream 108497 6248910 ~ 6306407 (-)
LOC118938166 LOC106592843 coding downstream 170291 6203971 ~ 6244613 (-)
LOC118938516 NA coding downstream 223209 6188058 ~ 6191695 (-)
LOC118938167 LOC106564205 coding downstream 237899 6173844 ~ 6177005 (-)
LOC110512959 LOC106592278 coding downstream 247429 6152197 ~ 6167475 (-)
LOC110485390 LOC106594684 coding upstream 12843 6429122 ~ 6450055 (-)
LOC110487211 LOC106564193 coding upstream 54194 6470473 ~ 6508696 (-)
LOC110485423 LOC106592905 coding upstream 128972 6545251 ~ 6584693 (-)
LOC118938537 NA coding upstream 175667 6591946 ~ 6593147 (-)
LOC110485426 LOC106594040 coding upstream 183862 6600141 ~ 6649233 (-)
G1140026 NA non-coding downstream 26218 6386555 ~ 6388686 (-)
G1140025 NA non-coding downstream 30354 6383928 ~ 6384550 (-)
G1140024 NA non-coding downstream 31036 6383644 ~ 6383868 (-)
G1140021 NA non-coding downstream 38340 6375815 ~ 6376564 (-)
G1140000 NA non-coding downstream 91148 6323527 ~ 6323756 (-)
G1140058 NA non-coding upstream 60 6416339 ~ 6416727 (-)
G1140067 NA non-coding upstream 36770 6453049 ~ 6453272 (-)
G1140052 NA non-coding upstream 53529 6469808 ~ 6470298 (-)
G1140068 NA non-coding upstream 72609 6488888 ~ 6489315 (-)
G1140087 LOC106564225 non-coding upstream 107338 6523617 ~ 6524037 (-)
G1139916 NA other downstream 321388 6092359 ~ 6093516 (-)
LOC110512654 LOC106592307 other downstream 365964 6044857 ~ 6058622 (-)
LOC118938515 LOC106592948 other downstream 742657 5671437 ~ 5678473 (-)
G1138553 LOC106592646 other downstream 1152391 5201055 ~ 5262513 (-)
LOC118938170 LOC106564207 other upstream 282103 6698319 ~ 6717102 (-)
LOC110510388 LOC106592846 other upstream 362969 6779248 ~ 6831814 (-)
LOC110494877 LOC106564203 other upstream 429131 6842471 ~ 6853303 (-)
G1140208 LOC106598633 other upstream 503450 6919729 ~ 6952206 (-)

Expression


Co-expression Network