G1140052


Basic Information

Item Value
gene id G1140052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 6469808 ~ 6470298 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299707
ATCATTATGATAATCACAACCCAACTGTATAAAGTTGAATTATACTATATATAATGTCACTGTAAATGCCCTGctgtcacggcagatttcctcctcttcgtctgaggaggaggaggagtaaggatcggaccaagatgtgGCGAGGTAATTCGTAATTTTAATgggaaaaactgaacactacaaaacaacaaagtgacaaccgtgaagctaatgaaTGATCGTGCtgaacacaaacactacacatagacaatcacccacaatccacaatgacaaaacaggctacctaaatatggttcccaatcagagacaacgactaacaccggcctctgattgagaaccatatcaggccaaacacagaaacagacaaactagacatccaacatagaatgcccactcagatcacaccctgaccaaacagaacatagaaacatacaaagcaaactatggtcagggtgtgacacctgcgGCAGCTAACTCACTGAGAAGACCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299707 True 491 lncRNA 0.42 1 6469808 6470298

Neighbor

gene id symbol gene type direction distance location
LOC110485390 LOC106594684 coding downstream 19753 6429122 ~ 6450055 (-)
LOC110519908 LOC106592827 coding downstream 163401 6248910 ~ 6306407 (-)
LOC118938166 LOC106592843 coding downstream 225195 6203971 ~ 6244613 (-)
LOC118938516 NA coding downstream 278113 6188058 ~ 6191695 (-)
LOC118938167 LOC106564205 coding downstream 292803 6173844 ~ 6177005 (-)
LOC110487211 LOC106564193 coding upstream 175 6470473 ~ 6508696 (-)
LOC110485423 LOC106592905 coding upstream 74953 6545251 ~ 6584693 (-)
LOC118938537 NA coding upstream 121648 6591946 ~ 6593147 (-)
LOC110485426 LOC106594040 coding upstream 129843 6600141 ~ 6649233 (-)
LOC110511140 LOC106564086 coding upstream 185246 6655544 ~ 6678570 (-)
G1140067 NA non-coding downstream 16536 6453049 ~ 6453272 (-)
G1140058 NA non-coding downstream 53081 6416339 ~ 6416727 (-)
G1140057 NA non-coding downstream 53529 6414904 ~ 6416279 (-)
G1140026 NA non-coding downstream 81122 6386555 ~ 6388686 (-)
G1140025 NA non-coding downstream 85258 6383928 ~ 6384550 (-)
G1140068 NA non-coding upstream 18590 6488888 ~ 6489315 (-)
G1140087 LOC106564225 non-coding upstream 53319 6523617 ~ 6524037 (-)
G1140096 NA non-coding upstream 98627 6568925 ~ 6570828 (-)
G1140097 NA non-coding upstream 100841 6571139 ~ 6573457 (-)
G1140099 NA non-coding upstream 120492 6590790 ~ 6591102 (-)
G1139916 NA other downstream 376292 6092359 ~ 6093516 (-)
LOC110512654 LOC106592307 other downstream 420868 6044857 ~ 6058622 (-)
LOC118938515 LOC106592948 other downstream 797561 5671437 ~ 5678473 (-)
G1138553 LOC106592646 other downstream 1207295 5201055 ~ 5262513 (-)
LOC118938170 LOC106564207 other upstream 228084 6698319 ~ 6717102 (-)
LOC110510388 LOC106592846 other upstream 308950 6779248 ~ 6831814 (-)
LOC110494877 LOC106564203 other upstream 375112 6842471 ~ 6853303 (-)
G1140208 LOC106598633 other upstream 449431 6919729 ~ 6952206 (-)

Expression


Co-expression Network