G1140097


Basic Information

Item Value
gene id G1140097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 6571139 ~ 6573457 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299753
GGTGAAGGTCTCTTTACTATGACCAGTGACAGTCTGAGCTACTGGGTGAAGGTCTCTTTACTATGACCAGTGACAGTCTGAGCTACTGGGTGAAGGTCTCTTTACTATGACCAGTAACAGTCTGAGCTACTGGGTGAAGGTCTCTTTACTATGAGCAGTGACAGTCTGAGCTACTGGGTGAAGACCAGAGTCTCTTTACTATGACCAGTGACAGTCTGAGTTGCTGGTGAAGACCAGAGTCTCTTTACTATGACCAGTGACAGTATGAGCTACTGGGTGAAGGTCTCTTTACTATGACCAGTGACAGTCTGAGGTACTGGGTGAAGGTCTCTTTACTATGACCATTGACAGTATGAGCTACTGGGTGAAGGTCTCTTTACTATGACCAGTGACAGTCTGAGCTACTGGGTGAAGGTCTCTTTACTATGACCAGTGACAGTCTGAGCTACTGGGTGAAGACCAGAGTCTTTACTAGAGCCTGTGTTTGGTATGTACAGAGCCTTAAGAAactattcacatcccttgactttatTCAAATTTTGTTGCGTTATAGGCTGACTTAAAAATCAATTAAATCTACATTTTGTGTCACTggatccacatgaatgtagaagtgtggATGCTAATGGTACTTACCTACGGTGCAGCAAGAGGAACTGgtcctccctaccttcaggctctgctgaaaccctacaccccaaccagagtactctgttctgccacctctggtctcttggccctccctaccttcaggctctgcTGAAACCCTACTCCCCAACCAGAgtactctgttctgccacctctggtctcttggtcctccctaccttcaggctctgctgaaaccctacaccccaaccagagtactctgttctgccacctctggtctcttggccctcttggccctccctaccttcaggctcagGTACTGCTACCTAATATCTAGatagatggagctgtgatgtacttctaccagatatctagatagatagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatagatagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatagatggagctgtgatgtactgctaccagatatctagataGATggagctgtgatgtactgctaccagatatctagatagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatagatagagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatggagctatgatgtactgctaccagatatctagatagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatagatagatgaagctgtgatgtactgctaccagatatctagatagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccagatatctagatggagctgtgatgtactgctaccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299753 True 1739 lncRNA 0.45 4 6571139 6573457

Neighbor

gene id symbol gene type direction distance location
LOC110487211 LOC106564193 coding downstream 62443 6470473 ~ 6508696 (-)
LOC110485390 LOC106594684 coding downstream 121084 6429122 ~ 6450055 (-)
LOC110519908 LOC106592827 coding downstream 264732 6248910 ~ 6306407 (-)
LOC118938166 LOC106592843 coding downstream 326526 6203971 ~ 6244613 (-)
LOC118938516 NA coding downstream 379444 6188058 ~ 6191695 (-)
LOC118938537 NA coding upstream 18489 6591946 ~ 6593147 (-)
LOC110485426 LOC106594040 coding upstream 26684 6600141 ~ 6649233 (-)
LOC110511140 LOC106564086 coding upstream 82087 6655544 ~ 6678570 (-)
LOC118938170 LOC106564207 coding upstream 124862 6698319 ~ 6717102 (-)
LOC110510388 LOC106592846 coding upstream 206549 6779248 ~ 6831814 (-)
G1140096 NA non-coding downstream 311 6568925 ~ 6570828 (-)
G1140087 LOC106564225 non-coding downstream 47102 6523617 ~ 6524037 (-)
G1140068 NA non-coding downstream 81824 6488888 ~ 6489315 (-)
G1140052 NA non-coding downstream 100841 6469808 ~ 6470298 (-)
G1140067 NA non-coding downstream 117867 6453049 ~ 6453272 (-)
G1140099 NA non-coding upstream 17333 6590790 ~ 6591102 (-)
G1140100 NA non-coding upstream 18056 6591513 ~ 6592780 (-)
G1140101 NA non-coding upstream 21223 6594680 ~ 6595051 (-)
G1140102 NA non-coding upstream 25345 6598802 ~ 6599032 (-)
G1139916 NA other downstream 477623 6092359 ~ 6093516 (-)
LOC110512654 LOC106592307 other downstream 522199 6044857 ~ 6058622 (-)
LOC118938515 LOC106592948 other downstream 898892 5671437 ~ 5678473 (-)
G1138553 LOC106592646 other downstream 1308626 5201055 ~ 5262513 (-)
LOC110494877 LOC106564203 other upstream 271953 6842471 ~ 6853303 (-)
G1140208 LOC106598633 other upstream 346272 6919729 ~ 6952206 (-)

Expression


Co-expression Network