Gene
RNA
| Item | Value |
|---|---|
| gene id | G1140300 |
| gene name | LOC107588454 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 7147582 ~ 7154273 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| UPF0668 protein C10orf76 homolog, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1300054 | True | 431 | lncRNA | 0.49 | 4 | 7147582 | 7154273 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513509 | LOC106593154 | coding | downstream | 147228 | 6923538 ~ 7083659 (-) |
| LOC118938173 | NA | coding | downstream | 273469 | 6872545 ~ 6874113 (-) |
| LOC110494877 | LOC106564203 | coding | downstream | 294279 | 6842471 ~ 6853303 (-) |
| LOC110510388 | LOC106592846 | coding | downstream | 315768 | 6779248 ~ 6831814 (-) |
| LOC118938170 | LOC106564207 | coding | downstream | 430480 | 6698319 ~ 6717102 (-) |
| LOC110485501 | LOC106596103 | coding | upstream | 130443 | 7284716 ~ 7290833 (-) |
| LOC110519431 | LOC106596103 | coding | upstream | 162041 | 7316314 ~ 7403758 (-) |
| LOC118938181 | NA | coding | upstream | 186803 | 7341076 ~ 7341680 (-) |
| LOC118938520 | LOC106596103 | coding | upstream | 259153 | 7413426 ~ 7423027 (-) |
| LOC118938180 | NA | coding | upstream | 280213 | 7434486 ~ 7436102 (-) |
| G1140298 | NA | non-coding | downstream | 859 | 7146377 ~ 7146723 (-) |
| G1140297 | NA | non-coding | downstream | 1668 | 7145714 ~ 7145914 (-) |
| G1140294 | NA | non-coding | downstream | 9479 | 7137314 ~ 7138103 (-) |
| G1140272 | NA | non-coding | downstream | 13788 | 7131544 ~ 7133794 (-) |
| G1140270 | NA | non-coding | downstream | 105892 | 7040627 ~ 7041690 (-) |
| G1140311 | NA | non-coding | upstream | 54699 | 7208972 ~ 7210810 (-) |
| G1140333 | NA | non-coding | upstream | 79349 | 7233622 ~ 7233985 (-) |
| G1140347 | NA | non-coding | upstream | 95204 | 7249477 ~ 7251992 (-) |
| G1140353 | NA | non-coding | upstream | 108936 | 7263209 ~ 7264346 (-) |
| G1140378 | NA | non-coding | upstream | 127693 | 7281966 ~ 7282466 (-) |
| G1140269 | NA | other | downstream | 105062 | 7038877 ~ 7042520 (-) |
| G1140208 | LOC106598633 | other | downstream | 195376 | 6919729 ~ 6952206 (-) |
| G1140323 | NA | other | upstream | 36423 | 7190696 ~ 7192243 (-) |
| G1140343 | NA | other | upstream | 91439 | 7245712 ~ 7246650 (-) |
| G1140367 | LOC106601621 | other | upstream | 313573 | 7409260 ~ 7695746 (-) |
| LOC110493310 | LOC106591489 | other | upstream | 348118 | 7490185 ~ 7534632 (-) |
| G1140368 | LOC106591490 | other | upstream | 505424 | 7659697 ~ 7730493 (-) |
