Gene
RNA
| Item | Value |
|---|---|
| gene id | G1140333 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 7233622 ~ 7233985 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| acidic leucine-rich nuclear phosphoprotein 32 family member B-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1300095 | True | 364 | lncRNA | 0.52 | 1 | 7233622 | 7233985 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513509 | LOC106593154 | coding | downstream | 233268 | 6923538 ~ 7083659 (-) |
| LOC118938173 | NA | coding | downstream | 359509 | 6872545 ~ 6874113 (-) |
| LOC110494877 | LOC106564203 | coding | downstream | 380319 | 6842471 ~ 6853303 (-) |
| LOC110510388 | LOC106592846 | coding | downstream | 401808 | 6779248 ~ 6831814 (-) |
| LOC118938170 | LOC106564207 | coding | downstream | 516520 | 6698319 ~ 6717102 (-) |
| LOC110485501 | LOC106596103 | coding | upstream | 50731 | 7284716 ~ 7290833 (-) |
| LOC110519431 | LOC106596103 | coding | upstream | 82329 | 7316314 ~ 7403758 (-) |
| LOC118938181 | NA | coding | upstream | 107091 | 7341076 ~ 7341680 (-) |
| LOC118938520 | LOC106596103 | coding | upstream | 179441 | 7413426 ~ 7423027 (-) |
| LOC118938180 | NA | coding | upstream | 200501 | 7434486 ~ 7436102 (-) |
| G1140311 | NA | non-coding | downstream | 22812 | 7208972 ~ 7210810 (-) |
| G1140300 | LOC107588454 | non-coding | downstream | 79349 | 7147582 ~ 7154273 (-) |
| G1140298 | NA | non-coding | downstream | 86899 | 7146377 ~ 7146723 (-) |
| G1140297 | NA | non-coding | downstream | 87708 | 7145714 ~ 7145914 (-) |
| G1140294 | NA | non-coding | downstream | 95519 | 7137314 ~ 7138103 (-) |
| G1140347 | NA | non-coding | upstream | 15492 | 7249477 ~ 7251992 (-) |
| G1140353 | NA | non-coding | upstream | 29224 | 7263209 ~ 7264346 (-) |
| G1140378 | NA | non-coding | upstream | 47981 | 7281966 ~ 7282466 (-) |
| G1140404 | NA | non-coding | upstream | 77753 | 7311738 ~ 7315568 (-) |
| G1140372 | NA | non-coding | upstream | 88714 | 7322699 ~ 7368886 (-) |
| G1140323 | NA | other | downstream | 41379 | 7190696 ~ 7192243 (-) |
| G1140269 | NA | other | downstream | 191102 | 7038877 ~ 7042520 (-) |
| G1140270 | NA | other | downstream | 191932 | 7040627 ~ 7041690 (-) |
| G1140208 | LOC106598633 | other | downstream | 281416 | 6919729 ~ 6952206 (-) |
| G1140343 | NA | other | upstream | 11727 | 7245712 ~ 7246650 (-) |
| G1140367 | LOC106601621 | other | upstream | 233861 | 7409260 ~ 7695746 (-) |
| LOC110493310 | LOC106591489 | other | upstream | 268406 | 7490185 ~ 7534632 (-) |
| G1140368 | LOC106591490 | other | upstream | 425712 | 7659697 ~ 7730493 (-) |
| LOC110485610 | hoga1 | other | upstream | 824961 | 8058941 ~ 8080347 (-) |
