G1140343


Basic Information

Item Value
gene id G1140343
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7245712 ~ 7246650 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1300105
ctccctctctcctcctctctctcaggtccTGGAGAGCTTGTTCAAATCAGATCCACTTGTTGCGATCTGGTCTTAAAGAGGAAACTGTGTCCTCTCCCCAGGGCttcctctctctggatctctctctctttctctgtccctgtcttctgcgtctctctttcctctctctctatcaatatctttctcactctctctctctctgggtgaagTTATCTCTAGGTCCagttctaggatcagcttccccccCTTATCAAAACtttaaatgcaaaactgaccctaggggcaacttcactcTACACCGAACCACTCAGTGTTCCTCCATCTGTCACACCCAAAGTGAAATTCCCCTTAGGTGCTGATATTAGGTCGGTTTTGCATTTCCACCACTAATGATTAGGATTGGAGGAGGCGAAGCTATCCTAGATCTGTATCTGTAGGAAACCTCGAAGCGACACACTCAAGAGGTCAAGGGTCAGAAAAGGAAGTCTCATTGttatgttctctctctttcttctcttctttcttcttcccaatgtttctctttctctcatgttTTCCTTTTTTCCAGTCCTTGTGGTGATTGAAACGTTccctttctcttcttcctctcttcttcctctcttcttcctcgcTTCTCCATTCTTTTTTCACCTCCTCTTttacttttttttctcccttgTGGTGAAACACCTCTCTttttgctctcctctcctctcttttcactctcctctctctctgctctcctctcctctctctctgctctcctctctctgctctcctctctctctgctctcctctctctctgctctcctctctcttttcactctcctcttctctatctctgcTCTCATCTCCCTTTtcactctcc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1300105 True 868 TUCP 0.46 2 7245712 7246650

Neighbor

gene id symbol gene type direction distance location
LOC110513509 LOC106593154 coding downstream 245358 6923538 ~ 7083659 (-)
LOC118938173 NA coding downstream 371599 6872545 ~ 6874113 (-)
LOC110494877 LOC106564203 coding downstream 392409 6842471 ~ 6853303 (-)
LOC110510388 LOC106592846 coding downstream 413898 6779248 ~ 6831814 (-)
LOC118938170 LOC106564207 coding downstream 528610 6698319 ~ 6717102 (-)
LOC110485501 LOC106596103 coding upstream 38066 7284716 ~ 7290833 (-)
LOC110519431 LOC106596103 coding upstream 69664 7316314 ~ 7403758 (-)
LOC118938181 NA coding upstream 94426 7341076 ~ 7341680 (-)
LOC118938520 LOC106596103 coding upstream 166776 7413426 ~ 7423027 (-)
LOC118938180 NA coding upstream 187836 7434486 ~ 7436102 (-)
G1140333 NA non-coding downstream 11727 7233622 ~ 7233985 (-)
G1140311 NA non-coding downstream 34902 7208972 ~ 7210810 (-)
G1140300 LOC107588454 non-coding downstream 91439 7147582 ~ 7154273 (-)
G1140298 NA non-coding downstream 98989 7146377 ~ 7146723 (-)
G1140297 NA non-coding downstream 99798 7145714 ~ 7145914 (-)
G1140347 NA non-coding upstream 2827 7249477 ~ 7251992 (-)
G1140353 NA non-coding upstream 16559 7263209 ~ 7264346 (-)
G1140378 NA non-coding upstream 35316 7281966 ~ 7282466 (-)
G1140404 NA non-coding upstream 65088 7311738 ~ 7315568 (-)
G1140372 NA non-coding upstream 76049 7322699 ~ 7368886 (-)
G1140323 NA other downstream 53469 7190696 ~ 7192243 (-)
G1140269 NA other downstream 203192 7038877 ~ 7042520 (-)
G1140270 NA other downstream 204022 7040627 ~ 7041690 (-)
G1140208 LOC106598633 other downstream 293506 6919729 ~ 6952206 (-)
G1140367 LOC106601621 other upstream 221196 7409260 ~ 7695746 (-)
LOC110493310 LOC106591489 other upstream 255741 7490185 ~ 7534632 (-)
G1140368 LOC106591490 other upstream 413047 7659697 ~ 7730493 (-)
LOC110485610 hoga1 other upstream 812296 8058941 ~ 8080347 (-)
G1141490 NA other upstream 1084485 8331135 ~ 8332518 (-)

Expression


Co-expression Network