G1140353


Basic Information

Item Value
gene id G1140353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7263209 ~ 7264346 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1300118
GTCTTGGCATGAGAACCAGGCCTTGTCCTTAAtggtaccttattccctatatagtgtcctatGCTTAACCAGATAGTGTaccatacagggaatagggtgccacttgtgACGCGGTTATAGTGAGATATTATACATAATACATGACAAGCTGCTCATAAACCCAGTCCAACGCTATGATGCTTCACTCATAAACCCAGTCCAACGCTATGATGCTTCACTCATAAACCCAGTCCAACGCTATGATGCTTCACTCATAAACCCAGTCCAACGCTATGATGCTTCACTCATAAACCCATTCCAACGCTATGATGCTTCACTCATAAACCCAGTCCCACGCTATGATGCTTCACTCATAAACCCAGTCCAACGCTATGATGCTTCACTCATAAACCCAGTCCAACGCTATGATGCTTCACTCATAAACCCAGTCCAACGCTATGATGCTTCACTCATTAGGGATTAATCAATACCATGTATCAATAATCAATCCATCAAATGTAGTTTGGAAAGTCAGGCCAGCCTGAATGGATcgtcatttcagtcatttagtaAACTCTACAATTCACATTGCTTCCTATCTCACTCATCCTCATAGCACGTACAGTACATGaccacaagtatgtggacacctgcatgtcgaacatctcattccagaatcatgggcattaatatggagttggtcccccatttgctgctataacagcctccattctacTGGgaaagcagtttggaactcagtagtgagtgtttcaACCGAGGCCAGAGGAGTTTTATGAGCTctccagtaaggccattctactgtcaatgtttgtctatggagattgcatggctgtgagatttgatttgatacacttgtaagcaacgggtgtggctgaaatagccaaatccactaatttgaaggggtgtccacatactttagtatatatagtgtattgatatggtagTTTCTATAATGGTACCTCATCAGCATAACGTCAAATCTCCTCTTTAACATGAACAAATGTGTGGAATGTCATTCACTTCAGCCAATGAGCATGGCACGCTAAGGCAATCCCACCCCGCTGTCTGATTAACCTATGGGCACGCTAAGGCAATCCCACGCCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1300118 True 1105 lncRNA 0.43 2 7263209 7264346

Neighbor

gene id symbol gene type direction distance location
LOC110513509 LOC106593154 coding downstream 262855 6923538 ~ 7083659 (-)
LOC118938173 NA coding downstream 389096 6872545 ~ 6874113 (-)
LOC110494877 LOC106564203 coding downstream 409906 6842471 ~ 6853303 (-)
LOC110510388 LOC106592846 coding downstream 431395 6779248 ~ 6831814 (-)
LOC118938170 LOC106564207 coding downstream 546107 6698319 ~ 6717102 (-)
LOC110485501 LOC106596103 coding upstream 20370 7284716 ~ 7290833 (-)
LOC110519431 LOC106596103 coding upstream 51968 7316314 ~ 7403758 (-)
LOC118938181 NA coding upstream 76730 7341076 ~ 7341680 (-)
LOC118938520 LOC106596103 coding upstream 149080 7413426 ~ 7423027 (-)
LOC118938180 NA coding upstream 170140 7434486 ~ 7436102 (-)
G1140347 NA non-coding downstream 11217 7249477 ~ 7251992 (-)
G1140333 NA non-coding downstream 29224 7233622 ~ 7233985 (-)
G1140311 NA non-coding downstream 52399 7208972 ~ 7210810 (-)
G1140300 LOC107588454 non-coding downstream 108936 7147582 ~ 7154273 (-)
G1140298 NA non-coding downstream 116486 7146377 ~ 7146723 (-)
G1140378 NA non-coding upstream 17620 7281966 ~ 7282466 (-)
G1140404 NA non-coding upstream 47392 7311738 ~ 7315568 (-)
G1140372 NA non-coding upstream 58353 7322699 ~ 7368886 (-)
G1140408 NA non-coding upstream 60434 7324780 ~ 7326845 (-)
G1140410 NA non-coding upstream 63303 7327649 ~ 7432227 (-)
G1140343 NA other downstream 16559 7245712 ~ 7246650 (-)
G1140323 NA other downstream 70966 7190696 ~ 7192243 (-)
G1140367 LOC106601621 other upstream 203500 7409260 ~ 7695746 (-)
LOC110493310 LOC106591489 other upstream 238045 7490185 ~ 7534632 (-)
G1140368 LOC106591490 other upstream 395351 7659697 ~ 7730493 (-)
LOC110485610 hoga1 other upstream 794600 8058941 ~ 8080347 (-)
G1141490 NA other upstream 1066789 8331135 ~ 8332518 (-)

Expression


Co-expression Network