Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139463 |
| gene name | LOC106591560 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 7319270 ~ 7414804 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1298955 | False | 263 | lncRNA | 0.48 | 2 | 7319270 | 7392617 |
| TU1298956 | False | 208 | lncRNA | 0.44 | 3 | 7341856 | 7392617 |
| TU1298953 | True | 781 | lncRNA | 0.44 | 3 | 7391835 | 7414804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485502 | kcnip2 | coding | upstream | 38560 | 7237567 ~ 7280710 (+) |
| LOC110517645 | cssa12h10orf76 | coding | upstream | 109238 | 7147638 ~ 7210032 (+) |
| LOC110513552 | LOC106591328 | coding | upstream | 185472 | 7101953 ~ 7133802 (+) |
| LOC118938519 | LOC106591213 | coding | upstream | 235966 | 7080815 ~ 7083304 (+) |
| LOC110515840 | LOC106593162 | coding | upstream | 236088 | 7064271 ~ 7083182 (+) |
| LOC118938182 | LOC106591493 | coding | downstream | 331597 | 7746401 ~ 7761076 (+) |
| LOC110485616 | LOC106591151 | coding | downstream | 348004 | 7762808 ~ 7888033 (+) |
| LOC110485612 | LOC106591159 | coding | downstream | 593010 | 8007814 ~ 8032920 (+) |
| LOC110511650 | LOC106591308 | coding | downstream | 666576 | 8081380 ~ 8096851 (+) |
| LOC110485576 | LOC106591187 | coding | downstream | 750566 | 8165370 ~ 8168323 (+) |
| G1139469 | NA | non-coding | upstream | 28937 | 7290057 ~ 7290333 (+) |
| G1139447 | NA | non-coding | upstream | 70992 | 7247748 ~ 7248278 (+) |
| G1139422 | NA | non-coding | upstream | 88915 | 7168598 ~ 7230355 (+) |
| G1139530 | LOC106591489 | non-coding | downstream | 931 | 7415735 ~ 7450048 (+) |
| G1139297 | NA | non-coding | downstream | 4445 | 7419249 ~ 7568135 (+) |
| G1139533 | LOC106605909 | non-coding | downstream | 7499 | 7422303 ~ 7469315 (+) |
| G1139537 | NA | non-coding | downstream | 21949 | 7436753 ~ 7437673 (+) |
| G1139539 | LOC106591489 | non-coding | downstream | 34622 | 7449426 ~ 7504707 (+) |
| LOC110485388 | LOC106592846 | other | upstream | 977382 | 6336889 ~ 6375515 (+) |
| LOC110513590 | NA | other | upstream | 1137229 | 6179347 ~ 6185375 (+) |
| G1138908 | NA | other | upstream | 1227222 | 5885765 ~ 6092048 (+) |
| G1138909 | NA | other | upstream | 1304547 | 5878360 ~ 6014723 (+) |
| G1139553 | NA | other | downstream | 60570 | 7475374 ~ 7502281 (+) |
| G1139317 | NA | other | downstream | 110788 | 7525592 ~ 7527157 (+) |
| G1140682 | NA | other | downstream | 719196 | 8134000 ~ 8134822 (+) |
