G1140458


Basic Information

Item Value
gene id G1140458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7509233 ~ 7510495 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1300264
gtcctggagtcactctctgttacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctggagtcactctgtctgttacaggtaacattctatatactggcagtcctggagtcactctgtctgttacaggtaacattctatatactggcagtcctggagtcactctgtctgttacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctggagtctctctgtctgttacaggtaacattctatatactggcagtcctggagtcactctgtctgttacaggtaacattctatatactggcagtcctggagtctctctgtctgttacaggtaacattctatatactggcagtcctggagtctctctgtctgttacaggtaacattctatatactggcagtcctggagtcactctctgttacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctagagtcactctgtctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1300264 True 689 lncRNA 0.44 2 7509233 7510495

Neighbor

gene id symbol gene type direction distance location
LOC118938174 LOC106592614 coding downstream 12453 7443617 ~ 7496780 (-)
LOC118938180 NA coding downstream 73131 7434486 ~ 7436102 (-)
LOC118938520 LOC106596103 coding downstream 86206 7413426 ~ 7423027 (-)
LOC110519431 LOC106596103 coding downstream 105475 7316314 ~ 7403758 (-)
LOC118938177 LOC106591664 coding upstream 19568 7530063 ~ 7564833 (-)
LOC118938179 NA coding upstream 35411 7545906 ~ 7546579 (-)
LOC118938178 LOC106601621 coding upstream 56452 7566947 ~ 7567941 (-)
LOC118938521 NA coding upstream 68179 7578674 ~ 7699845 (-)
LOC110494997 LOC106598058 coding upstream 114657 7625152 ~ 7671859 (-)
LOC110493310 LOC106591489 non-coding downstream 4534 7490185 ~ 7534632 (-)
G1140448 NA non-coding downstream 48130 7458227 ~ 7461103 (-)
G1140370 LOC106591489 non-coding downstream 57564 7415596 ~ 7451669 (-)
G1140410 NA non-coding downstream 77006 7327649 ~ 7432227 (-)
G1140386 NA non-coding downstream 77430 7429962 ~ 7431803 (-)
G1140461 NA non-coding upstream 4794 7515289 ~ 7646844 (-)
G1140471 NA non-coding upstream 36244 7546739 ~ 7547126 (-)
G1140473 NA non-coding upstream 59356 7569851 ~ 7570855 (-)
G1140486 NA non-coding upstream 98069 7608564 ~ 7642221 (-)
G1140343 NA other downstream 262583 7245712 ~ 7246650 (-)
G1140323 NA other downstream 316990 7190696 ~ 7192243 (-)
LOC110513509 LOC106593154 other downstream 427778 6923538 ~ 7083659 (-)
G1140368 LOC106591490 other upstream 149202 7659697 ~ 7730493 (-)
LOC110485610 hoga1 other upstream 548451 8058941 ~ 8080347 (-)
G1141490 NA other upstream 820640 8331135 ~ 8332518 (-)
G1141517 NA other upstream 916118 8426613 ~ 8452319 (-)
G1141579 NA other upstream 1080470 8590965 ~ 8592898 (-)

Expression


Co-expression Network