G1140473


Basic Information

Item Value
gene id G1140473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7569851 ~ 7570855 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1300282
AGCCAGTGTTGTGTTTCATTAGTTTGTTATGTTGTTATTGACCCAAAATGTTTGAGGACATTATTATTAGGTACCAGTACTAAACACAACGACCAacagtggttgtgtgtgtgtgtgtgtgtggttttactatccttgtgtggaccagaagtcctcacaaggacagAAAATCAAGGAAAAGTTGGACAAGTGGGTACATTTCACAGGTCcacacaaggaaaaaggctatttttgtTTGAGGGTTAATTTTCGACTTAGacttaggtttaggggttaggattaagaTTAGAGTTAGTGGTTaggtaaaacatattttgaatgGGAATAACTGTTTTGGTCCAGGACAGTAACACAACATTTTGTCTGTGTTtgtcattagtttactccaattagaggagaggaggtagggtaaGGGGAACATAATAAAGATTCAGATTGTTTAATAGACACATGCacagggttgcaggtgtaattgcagggtacagtgaacaTCTTAGGCTTCgagctccaacatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1300282 True 516 lncRNA 0.39 2 7569851 7570855

Neighbor

gene id symbol gene type direction distance location
LOC118938178 LOC106601621 coding downstream 1910 7566947 ~ 7567941 (-)
LOC118938177 LOC106591664 coding downstream 5018 7530063 ~ 7564833 (-)
LOC118938179 NA coding downstream 23272 7545906 ~ 7546579 (-)
LOC110493310 LOC106591489 coding downstream 35219 7490185 ~ 7534632 (-)
LOC118938174 LOC106592614 coding downstream 73071 7443617 ~ 7496780 (-)
LOC118938521 NA coding upstream 7819 7578674 ~ 7699845 (-)
LOC110494997 LOC106598058 coding upstream 54297 7625152 ~ 7671859 (-)
LOC118938175 LOC106564328 coding upstream 101917 7672772 ~ 7698366 (-)
LOC118938176 LOC106592614 coding upstream 112111 7682966 ~ 7689906 (-)
LOC110493317 LOC106591490 coding upstream 143518 7714373 ~ 7733873 (-)
G1140471 NA non-coding downstream 22725 7546739 ~ 7547126 (-)
G1140458 NA non-coding downstream 59356 7509233 ~ 7510495 (-)
G1140448 NA non-coding downstream 108748 7458227 ~ 7461103 (-)
G1140486 NA non-coding upstream 37709 7608564 ~ 7642221 (-)
G1140375 NA non-coding upstream 77258 7648113 ~ 7697970 (-)
G1140368 LOC106591490 non-coding upstream 88842 7659697 ~ 7730493 (-)
G1140498 NA non-coding upstream 94856 7665711 ~ 7667999 (-)
G1140343 NA other downstream 323201 7245712 ~ 7246650 (-)
G1140323 NA other downstream 377608 7190696 ~ 7192243 (-)
G1140269 NA other downstream 527331 7038877 ~ 7042520 (-)
LOC110485610 hoga1 other upstream 488091 8058941 ~ 8080347 (-)
G1141490 NA other upstream 760280 8331135 ~ 8332518 (-)
G1141517 NA other upstream 855758 8426613 ~ 8452319 (-)
G1141579 NA other upstream 1020110 8590965 ~ 8592898 (-)

Expression


Co-expression Network