G1140486


Basic Information

Item Value
gene id G1140486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7608564 ~ 7642221 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1300296
gtcctggagtcactctgtctgtaacaggtaacattctatatcctggcagtcctggagtcactctgtctgttacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacatgTAACATTCTATATCCTGttagtcctggagtcactctgtctgtcacaggtaacattctatatactggcagtcctggagtcactctgtctgtcacaggtaacattctatatactggcagtcctggagtcactctgtctgttacaggtaacattctatatactggcagtcctggagtcactctgtctatcacaggtaacattctatatactggcagtcctggagtcactctgtctgtaacaggtaacattctatatactggcagtcctggagtcactctgtctttaacaggtaacattctatatcctgttagtcctggagtcactctgtctgttacaggtacaGTTACATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1300296 True 569 lncRNA 0.44 3 7608564 7642221

Neighbor

gene id symbol gene type direction distance location
LOC118938178 LOC106601621 coding downstream 40623 7566947 ~ 7567941 (-)
LOC118938177 LOC106591664 coding downstream 43731 7530063 ~ 7564833 (-)
LOC118938179 NA coding downstream 61985 7545906 ~ 7546579 (-)
LOC110493310 LOC106591489 coding downstream 73932 7490185 ~ 7534632 (-)
LOC118938174 LOC106592614 coding downstream 111784 7443617 ~ 7496780 (-)
LOC118938175 LOC106564328 coding upstream 30551 7672772 ~ 7698366 (-)
LOC118938176 LOC106592614 coding upstream 40745 7682966 ~ 7689906 (-)
LOC110493317 LOC106591490 coding upstream 72152 7714373 ~ 7733873 (-)
LOC118938522 LOC106591490 coding upstream 91824 7734045 ~ 7736476 (-)
LOC118938183 LOC106591333 coding upstream 283712 7925933 ~ 8006473 (-)
G1140473 NA non-coding downstream 37709 7569851 ~ 7570855 (-)
G1140471 NA non-coding downstream 61438 7546739 ~ 7547126 (-)
G1140458 NA non-coding downstream 98069 7509233 ~ 7510495 (-)
G1140375 NA non-coding upstream 5892 7648113 ~ 7697970 (-)
LOC118938521 NA non-coding upstream 7763 7578674 ~ 7699845 (-)
G1140368 LOC106591490 non-coding upstream 17476 7659697 ~ 7730493 (-)
G1140498 NA non-coding upstream 23490 7665711 ~ 7667999 (-)
G1140499 NA non-coding upstream 23696 7665917 ~ 7672113 (-)
G1140343 NA other downstream 361914 7245712 ~ 7246650 (-)
G1140323 NA other downstream 416321 7190696 ~ 7192243 (-)
G1140269 NA other downstream 566044 7038877 ~ 7042520 (-)
LOC110485610 hoga1 other upstream 416725 8058941 ~ 8080347 (-)
G1141490 NA other upstream 688914 8331135 ~ 8332518 (-)
G1141517 NA other upstream 784392 8426613 ~ 8452319 (-)
G1141579 NA other upstream 948744 8590965 ~ 8592898 (-)

Expression


Co-expression Network