G1140375


Basic Information

Item Value
gene id G1140375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7648113 ~ 7697970 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1300160
GTTTGTTTCCATGAACTTCTGTATCCTGTTATGTGCATGGCCATGCTATtgtaatgtatgttttgtttttctgttaTTTACAGTATACTCTGTAGATGTATTTCTGTGTATTTAATCTGATACAGTATTGTACATGGGGTTACACATATAATACTTTAGCATGGTATTTTAAGGACTCTGAAAGCAAGAGATTGTTGTGGAGACTTGTTTGAAAATGACCTAAAGTAAGACTGAGAGTAACAGTGATTAGGTGTATGCTTCGTAAGAGCTTTAGGAGTAATATTAACATGAgagacagtgatggtgggttgtgtttaggagtagtattaacatgagacacagtgatggtgggttgtatttaggagtagtattaacatgagacacagtgatggtgggttgtgtttaggagtagtattaacatgagacacagtgatggtgggttgtgtttaggagtagtattaacatgagacagtgatggtgggttgtgtttaggagtagtattaacatgagacacagtgatggtgggtgtgtttaggagtagtattaacatgagacacagtgatggtgggttgtgtttaggagtagtattaacatgagacacagtgatggtgggttgtgtttaggagtagtattaacatgagacacagtgatggtggatTGAAATGTgtcctttccaacaatgcagagttaaagataaaaatacagtgtattcggaaagtattcagaccccttgactttttccatattttgttacgttacagccttattctaaaatggattcaattgttttttctccctcatcaatcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1300160 True 808 lncRNA 0.37 2 7648113 7697970

Neighbor

gene id symbol gene type direction distance location
LOC118938178 LOC106601621 coding downstream 80172 7566947 ~ 7567941 (-)
LOC118938177 LOC106591664 coding downstream 83280 7530063 ~ 7564833 (-)
LOC118938179 NA coding downstream 101534 7545906 ~ 7546579 (-)
LOC110493310 LOC106591489 coding downstream 113481 7490185 ~ 7534632 (-)
LOC118938174 LOC106592614 coding downstream 151333 7443617 ~ 7496780 (-)
LOC110493317 LOC106591490 coding upstream 16403 7714373 ~ 7733873 (-)
LOC118938522 LOC106591490 coding upstream 36075 7734045 ~ 7736476 (-)
LOC118938183 LOC106591333 coding upstream 227963 7925933 ~ 8006473 (-)
LOC110485610 hoga1 coding upstream 360971 8058941 ~ 8080347 (-)
LOC110518530 LOC106591329 coding upstream 400539 8098509 ~ 8119143 (-)
G1140461 NA non-coding downstream 1269 7515289 ~ 7646844 (-)
G1140486 NA non-coding downstream 5892 7608564 ~ 7642221 (-)
G1140436 NA non-coding downstream 25113 7407978 ~ 7623000 (-)
G1140473 NA non-coding downstream 77258 7569851 ~ 7570855 (-)
G1140471 NA non-coding downstream 100987 7546739 ~ 7547126 (-)
G1140526 NA non-coding upstream 52824 7750794 ~ 7751003 (-)
G1140531 NA non-coding upstream 58967 7756937 ~ 7761076 (-)
G1140558 NA non-coding upstream 131153 7829123 ~ 7829555 (-)
G1140559 NA non-coding upstream 135401 7833371 ~ 7833723 (-)
G1140560 NA non-coding upstream 138506 7836476 ~ 7836694 (-)
G1140343 NA other downstream 401463 7245712 ~ 7246650 (-)
G1140323 NA other downstream 455870 7190696 ~ 7192243 (-)
G1140269 NA other downstream 605593 7038877 ~ 7042520 (-)
G1141490 NA other upstream 633165 8331135 ~ 8332518 (-)
G1141517 NA other upstream 728643 8426613 ~ 8452319 (-)
G1141579 NA other upstream 892995 8590965 ~ 8592898 (-)
ncf4 p40phox other upstream 961589 8655106 ~ 8696718 (-)

Expression


Co-expression Network