Gene
RNA
| Item | Value |
|---|---|
| gene id | G1140560 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 7836476 ~ 7836694 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1300394 | True | 219 | lncRNA | 0.38 | 1 | 7836476 | 7836694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938522 | LOC106591490 | coding | downstream | 100000 | 7734045 ~ 7736476 (-) |
| LOC110493317 | LOC106591490 | coding | downstream | 102603 | 7714373 ~ 7733873 (-) |
| LOC118938175 | LOC106564328 | coding | downstream | 138110 | 7672772 ~ 7698366 (-) |
| LOC118938176 | LOC106592614 | coding | downstream | 146570 | 7682966 ~ 7689906 (-) |
| LOC110494997 | LOC106598058 | coding | downstream | 164617 | 7625152 ~ 7671859 (-) |
| LOC118938183 | LOC106591333 | coding | upstream | 89239 | 7925933 ~ 8006473 (-) |
| LOC110485610 | hoga1 | coding | upstream | 222247 | 8058941 ~ 8080347 (-) |
| LOC110518530 | LOC106591329 | coding | upstream | 261815 | 8098509 ~ 8119143 (-) |
| LOC110485578 | LOC105012087 | coding | upstream | 343787 | 8180481 ~ 8201020 (-) |
| LOC110485582 | LOC106591223 | coding | upstream | 388604 | 8225298 ~ 8262940 (-) |
| G1140559 | NA | non-coding | downstream | 2753 | 7833371 ~ 7833723 (-) |
| G1140558 | NA | non-coding | downstream | 6921 | 7829123 ~ 7829555 (-) |
| G1140531 | NA | non-coding | downstream | 75400 | 7756937 ~ 7761076 (-) |
| G1140526 | NA | non-coding | downstream | 85473 | 7750794 ~ 7751003 (-) |
| G1140504 | NA | non-coding | downstream | 125609 | 7696547 ~ 7710867 (-) |
| G1140561 | NA | non-coding | upstream | 1344 | 7838038 ~ 7838248 (-) |
| G1140563 | NA | non-coding | upstream | 6691 | 7843385 ~ 7843779 (-) |
| G1140564 | NA | non-coding | upstream | 7849 | 7844543 ~ 7844993 (-) |
| G1140582 | NA | non-coding | upstream | 45857 | 7882551 ~ 7882853 (-) |
| G1140583 | NA | non-coding | upstream | 46359 | 7883053 ~ 7883361 (-) |
| G1140367 | LOC106601621 | other | downstream | 140730 | 7409260 ~ 7695746 (-) |
| G1140368 | LOC106591490 | other | downstream | 176155 | 7659697 ~ 7730493 (-) |
| LOC110493310 | LOC106591489 | other | downstream | 331777 | 7490185 ~ 7534632 (-) |
| G1140343 | NA | other | downstream | 589826 | 7245712 ~ 7246650 (-) |
| G1140323 | NA | other | downstream | 644233 | 7190696 ~ 7192243 (-) |
| G1141490 | NA | other | upstream | 494441 | 8331135 ~ 8332518 (-) |
| G1141517 | NA | other | upstream | 589919 | 8426613 ~ 8452319 (-) |
| G1141579 | NA | other | upstream | 754271 | 8590965 ~ 8592898 (-) |
| ncf4 | p40phox | other | upstream | 822865 | 8655106 ~ 8696718 (-) |
