Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139711 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 7879065 ~ 7879310 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/arginine repetitive matrix protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1299268 | True | 246 | lncRNA | 0.33 | 1 | 7879065 | 7879310 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938182 | LOC106591493 | coding | upstream | 117989 | 7746401 ~ 7761076 (+) |
| LOC110485502 | kcnip2 | coding | upstream | 598355 | 7237567 ~ 7280710 (+) |
| LOC110517645 | cssa12h10orf76 | coding | upstream | 669033 | 7147638 ~ 7210032 (+) |
| LOC110513552 | LOC106591328 | coding | upstream | 745267 | 7101953 ~ 7133802 (+) |
| LOC118938519 | LOC106591213 | coding | upstream | 795761 | 7080815 ~ 7083304 (+) |
| LOC110485612 | LOC106591159 | coding | downstream | 128504 | 8007814 ~ 8032920 (+) |
| LOC110511650 | LOC106591308 | coding | downstream | 202070 | 8081380 ~ 8096851 (+) |
| LOC110485576 | LOC106591187 | coding | downstream | 286060 | 8165370 ~ 8168323 (+) |
| LOC110487245 | LOC106564368 | coding | downstream | 321731 | 8201041 ~ 8217219 (+) |
| LOC110487246 | LOC106564362 | coding | downstream | 397143 | 8276453 ~ 8318343 (+) |
| G1139709 | NA | non-coding | upstream | 5162 | 7871659 ~ 7873903 (+) |
| G1139705 | NA | non-coding | upstream | 18144 | 7860525 ~ 7860921 (+) |
| G1139696 | NA | non-coding | upstream | 38919 | 7839555 ~ 7840146 (+) |
| G1139695 | NA | non-coding | upstream | 39715 | 7839091 ~ 7839350 (+) |
| G1139694 | NA | non-coding | upstream | 40652 | 7838194 ~ 7838413 (+) |
| G1139713 | NA | non-coding | downstream | 3104 | 7882414 ~ 7882934 (+) |
| LOC110485616 | LOC106591151 | non-coding | downstream | 4563 | 7762808 ~ 7888033 (+) |
| G1140599 | NA | non-coding | downstream | 31315 | 7910625 ~ 7911039 (+) |
| G1140601 | NA | non-coding | downstream | 33370 | 7912680 ~ 7915538 (+) |
| G1140602 | NA | non-coding | downstream | 39947 | 7919257 ~ 7921396 (+) |
| G1139317 | NA | other | upstream | 351908 | 7525592 ~ 7527157 (+) |
| G1139553 | NA | other | upstream | 376784 | 7475374 ~ 7502281 (+) |
| G1140682 | NA | other | downstream | 254690 | 8134000 ~ 8134822 (+) |
| LOC118938189 | LOC106591430 | other | downstream | 691693 | 8570729 ~ 8594285 (+) |
| G1140953 | NA | other | downstream | 761838 | 8641148 ~ 8694875 (+) |
| cbx6a | cbx6 | other | downstream | 911889 | 8790681 ~ 8810954 (+) |
| LOC110487255 | LOC106591397 | other | downstream | 957375 | 8828237 ~ 8840946 (+) |
