G1141435


Basic Information

Item Value
gene id G1141435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8235231 ~ 8319542 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1301491
AAATCTAATTTaaatctaagttaaagaatgcACTTTAcatcaagtttgatttgatttagtcctattcctTAACTTTGATTCTTGGTTGAGAttgagacgtgaatccaacacataaatgattaatttgtagacaaactggaattaaagccagactcagtCAGTGGCAAAAAAAGAGATCTACATCtcaacacaattcaatatcacttttaGAAAGCCTTTTAACTTATCGACAAGTTAACAAataatatgttggattcacatgtACAACTAATCCAAAAATGCACTTTTTTTTAAGCCAGTAGCTCGGGTTAAACTATCCAAGCATTCGAtatcctttaaatgttgatatctGGCTGCGTTATTACAATTCAATACTAGTTCTGTAAGACCGTAAACAGCCTAAAGTTAAGGCTGTCTGACAAAGTAATGTAGTAGTATTTATTCAGCCTTAAAaggagtaacacatccatggccacatgtTGAGGTTCGCCTACAGTAACTATACATGTCTTCTCATGTCTTCATAGAAAGCGCGCAGGTCTGCGGAGATGTTCACGATTGCTCTAATAATCTGAACAGAATCTCAAACAGCGTTGGTGACTTGCACCATCTgtaatccaggtcatttggttgtgctgTCAGATGAGGCACAGTGATAACACGTTCATTTCTGACTATGTATTCCCACTTCAACTGTGTTGTGcgtttaaatggttgaaagtgcaGTGAAACACATTTAGACATCTTAACTAAAACATCGGACGTTGTTTTCCAATTGGAATTTGTCTTTTTTAGGCggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAGGTTgtttgaaagcatagtgataacactggGATTTGTCTTTTAGGAggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAggttggttgaaagcatagtgataacactggGATTTGTCTTTTAGGAGGTTg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1301491 True 1216 lncRNA 0.37 2 8235231 8319542

Neighbor

gene id symbol gene type direction distance location
LOC110485578 LOC105012087 coding downstream 34211 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 116088 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 154884 8058941 ~ 8080347 (-)
LOC118938183 LOC106591333 coding downstream 228758 7925933 ~ 8006473 (-)
LOC118938522 LOC106591490 coding downstream 498755 7734045 ~ 7736476 (-)
ncf4 p40phox coding upstream 335564 8655106 ~ 8696718 (-)
LOC110515367 LOC106591437 coding upstream 409681 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 419193 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 550479 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 554492 8874034 ~ 8878068 (-)
G1141439 NA non-coding downstream 46064 8186145 ~ 8189167 (-)
G1140822 NA non-coding downstream 62963 8171003 ~ 8172268 (-)
G1140821 NA non-coding downstream 64312 8170377 ~ 8170919 (-)
G1140807 NA non-coding downstream 74722 8132159 ~ 8160509 (-)
G1141459 LOC106591407 non-coding upstream 9548 8329090 ~ 8522724 (-)
G1141476 NA non-coding upstream 19393 8338935 ~ 8340345 (-)
G1141460 NA non-coding upstream 38928 8358470 ~ 8360548 (-)
G1141464 LOC106605908 non-coding upstream 46435 8365977 ~ 8470243 (-)
G1141504 NA non-coding upstream 58019 8377561 ~ 8378822 (-)
G1140367 LOC106601621 other downstream 539485 7409260 ~ 7695746 (-)
G1140368 LOC106591490 other downstream 574910 7659697 ~ 7730493 (-)
LOC110493310 LOC106591489 other downstream 730532 7490185 ~ 7534632 (-)
G1140343 NA other downstream 988581 7245712 ~ 7246650 (-)
G1141490 NA other upstream 11593 8331135 ~ 8332518 (-)
G1141517 NA other upstream 107071 8426613 ~ 8452319 (-)
G1141579 NA other upstream 271423 8590965 ~ 8592898 (-)

Expression


Co-expression Network