Gene
RNA
| Item | Value |
|---|---|
| gene id | G1141458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 8276122 ~ 8276431 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1301518 | True | 278 | lncRNA | 0.36 | 2 | 8276122 | 8276431 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| atpv0e2 | va0e2 | coding | downstream | 6432 | 8265675 ~ 8269763 (-) |
| LOC110485582 | LOC106591223 | coding | downstream | 13182 | 8225298 ~ 8262940 (-) |
| LOC110485578 | LOC105012087 | coding | downstream | 75102 | 8180481 ~ 8201020 (-) |
| LOC110518530 | LOC106591329 | coding | downstream | 156979 | 8098509 ~ 8119143 (-) |
| LOC110485610 | hoga1 | coding | downstream | 195775 | 8058941 ~ 8080347 (-) |
| ncf4 | p40phox | coding | upstream | 378675 | 8655106 ~ 8696718 (-) |
| LOC110515367 | LOC106591437 | coding | upstream | 452792 | 8729223 ~ 8738426 (-) |
| LOC110515366 | pla2g6 | coding | upstream | 462304 | 8738735 ~ 8787152 (-) |
| LOC118938524 | LOC106590932 | coding | upstream | 593590 | 8870021 ~ 8872667 (-) |
| LOC118938192 | NA | coding | upstream | 597603 | 8874034 ~ 8878068 (-) |
| G1141453 | NA | non-coding | downstream | 24502 | 8251156 ~ 8251620 (-) |
| G1141439 | NA | non-coding | downstream | 86955 | 8186145 ~ 8189167 (-) |
| G1141461 | NA | non-coding | upstream | 199 | 8276630 ~ 8301593 (-) |
| G1141462 | NA | non-coding | upstream | 17058 | 8293489 ~ 8370459 (-) |
| G1141459 | LOC106591407 | non-coding | upstream | 52659 | 8329090 ~ 8522724 (-) |
| G1141476 | NA | non-coding | upstream | 62504 | 8338935 ~ 8340345 (-) |
| G1141460 | NA | non-coding | upstream | 82039 | 8358470 ~ 8360548 (-) |
| G1140367 | LOC106601621 | other | downstream | 580376 | 7409260 ~ 7695746 (-) |
| G1140368 | LOC106591490 | other | downstream | 615801 | 7659697 ~ 7730493 (-) |
| LOC110493310 | LOC106591489 | other | downstream | 771423 | 7490185 ~ 7534632 (-) |
| G1140343 | NA | other | downstream | 1029472 | 7245712 ~ 7246650 (-) |
| G1141490 | NA | other | upstream | 54704 | 8331135 ~ 8332518 (-) |
| G1141517 | NA | other | upstream | 150182 | 8426613 ~ 8452319 (-) |
| G1141579 | NA | other | upstream | 314534 | 8590965 ~ 8592898 (-) |
