Gene
RNA
| Item | Value |
|---|---|
| gene id | G1141461 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 8276630 ~ 8301593 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tetratricopeptide repeat protein 31-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1301526 | True | 667 | lncRNA | 0.54 | 3 | 8276630 | 8301593 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| atpv0e2 | va0e2 | coding | downstream | 6940 | 8265675 ~ 8269763 (-) |
| LOC110485582 | LOC106591223 | coding | downstream | 13690 | 8225298 ~ 8262940 (-) |
| LOC110485578 | LOC105012087 | coding | downstream | 75610 | 8180481 ~ 8201020 (-) |
| LOC110518530 | LOC106591329 | coding | downstream | 157487 | 8098509 ~ 8119143 (-) |
| LOC110485610 | hoga1 | coding | downstream | 196283 | 8058941 ~ 8080347 (-) |
| ncf4 | p40phox | coding | upstream | 353513 | 8655106 ~ 8696718 (-) |
| LOC110515367 | LOC106591437 | coding | upstream | 427630 | 8729223 ~ 8738426 (-) |
| LOC110515366 | pla2g6 | coding | upstream | 437142 | 8738735 ~ 8787152 (-) |
| LOC118938524 | LOC106590932 | coding | upstream | 568428 | 8870021 ~ 8872667 (-) |
| LOC118938192 | NA | coding | upstream | 572441 | 8874034 ~ 8878068 (-) |
| G1141458 | NA | non-coding | downstream | 199 | 8276122 ~ 8276431 (-) |
| G1141453 | NA | non-coding | downstream | 25010 | 8251156 ~ 8251620 (-) |
| G1141439 | NA | non-coding | downstream | 87463 | 8186145 ~ 8189167 (-) |
| G1141459 | LOC106591407 | non-coding | upstream | 27497 | 8329090 ~ 8522724 (-) |
| G1141476 | NA | non-coding | upstream | 37342 | 8338935 ~ 8340345 (-) |
| G1141460 | NA | non-coding | upstream | 56877 | 8358470 ~ 8360548 (-) |
| G1141464 | LOC106605908 | non-coding | upstream | 64384 | 8365977 ~ 8470243 (-) |
| G1141504 | NA | non-coding | upstream | 75968 | 8377561 ~ 8378822 (-) |
| G1140367 | LOC106601621 | other | downstream | 580884 | 7409260 ~ 7695746 (-) |
| G1140368 | LOC106591490 | other | downstream | 616309 | 7659697 ~ 7730493 (-) |
| LOC110493310 | LOC106591489 | other | downstream | 771931 | 7490185 ~ 7534632 (-) |
| G1140343 | NA | other | downstream | 1029980 | 7245712 ~ 7246650 (-) |
| G1141490 | NA | other | upstream | 29542 | 8331135 ~ 8332518 (-) |
| G1141517 | NA | other | upstream | 125020 | 8426613 ~ 8452319 (-) |
| G1141579 | NA | other | upstream | 289372 | 8590965 ~ 8592898 (-) |
