G1141462



Basic Information


Item Value
gene id G1141462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8293489 ~ 8370459 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1301527
cacacactgcaggagagtgAAGGTCCTCATGGCcttttacagcacaggagtaacTGTCTGCATCACTAAAGGAGTCTGAGTACAGGCTGGAAGTGTCCTCCTTTACTTTgtgtccgttcttgtaccagatgtaggtggggttgtcaggcagagtacagggagtggatcTTTAATAACTAAACAAGGTGTACCATCtacactgggagtcaggaagcaagtacagggagtggatcTTTAATAACTAAACAAGCATAGACCAGAACGAGACACACGCGTAGTGTACAGCCATGGAAcacaaacagagtcaataacgcctggggaaggaaccaaagggatgactgatatagggaaggtaatcagggagatgatggagtccaggtgagtctgatgaggcgCTGATGCGCataacaatggtgacaggtgtgtgtagtAATGAGCCAGACGACCTCGagcgccggagagggagtatacaaGCTGCAACGGTgttggaaaaaaaaaa

Function


NR:

description
PREDICTED: uncharacterized protein LOC106601629

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1301527 True 499 lncRNA 0.48 4 8293489 8370459

Neighbor


gene id symbol gene type direction distance location
atpv0e2 va0e2 coding downstream 23799 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 30549 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 92469 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 174346 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 213142 8058941 ~ 8080347 (-)
ncf4 p40phox coding upstream 284647 8655106 ~ 8696718 (-)
LOC110515367 LOC106591437 coding upstream 358764 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 368276 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 499562 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 503575 8874034 ~ 8878068 (-)
G1141458 NA non-coding downstream 17058 8276122 ~ 8276431 (-)
G1141453 NA non-coding downstream 41869 8251156 ~ 8251620 (-)
G1141439 NA non-coding downstream 104322 8186145 ~ 8189167 (-)
G1141504 NA non-coding upstream 7102 8377561 ~ 8378822 (-)
G1141516 LOC106605911 non-coding upstream 27746 8398205 ~ 8455438 (-)
G1141519 NA non-coding upstream 33267 8403726 ~ 8404102 (-)
G1141522 NA non-coding upstream 40143 8410602 ~ 8463890 (-)
G1141466 NA non-coding upstream 45239 8415698 ~ 8471938 (-)
G1140367 LOC106601621 other downstream 597743 7409260 ~ 7695746 (-)
G1140368 LOC106591490 other downstream 633168 7659697 ~ 7730493 (-)
LOC110493310 LOC106591489 other downstream 788790 7490185 ~ 7534632 (-)
G1140343 NA other downstream 1046839 7245712 ~ 7246650 (-)
G1141517 NA other upstream 56154 8426613 ~ 8452319 (-)
G1141579 NA other upstream 220506 8590965 ~ 8592898 (-)
G1141636 cbx6 other upstream 423398 8793857 ~ 8797212 (-)

Expression



Co-expression Network