G1141490


Basic Information

Item Value
gene id G1141490
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8331135 ~ 8332518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1301574
ccaatgctcaaatcaaatccaaattgtatttgtcacatgtgccgaatacaatgaaatgcttacttacaagctcttaaccaacaatgcagtttaaagaaaatacctaaaaagatacaaataaaaaagtaagagataagaaaaataaataacaagagcagcagtaaataacaatagcgggggctatttacagggggtaacggtacaaAGGCCAATGTGCAATGGTGTTTGTGCAACAGAGTCAAtgtctccagagtccaatggtggcgagctttaaaccactccagccgacgcttggcattgcacatggtgatcttaggcttgtgtgcggctgctcggccttagaaacccatttcatgaagctccctatGAACAGTTGTTGtgctaacgttgcttccagagacagtttggaactcggtagggagtgttgcaacACGGTATGCGCAACCACTTTGCggctgtgtggcctaccactttgcggctgtgtggcctaccactttgcggctgagcagttgttgctctcagatgtttccacttcacaataacagcacctacagtcgaccggggcagctccagcagggcagaaattttacaaactgacttgttgaaaaggagGCATCCTTTGATGGTgttacgttgaaagtcactgagctcttcattaaggccattctactgccaatgtttgtttatggagattgaatggctgtgtgctcgattttatacacctgtcagcaacgggtgtggctgaaatagcctaatccactaatttgaaggggtgtccactttCGTATATATAGAGTACAAGGTTTTTGTTAAACTTTTTGTTTTCAGGTCTTCTTgattctgggtttgttgtgttcaggtcttcttggttctgggtttgttgtgttcaggtcttcttggttctgggtttgttgtgttcaggtcttcttggttctgggtttgttgtgttcaggtcttcttggttctgggtttgttgtgttcaggtgttcttggttctgggtttgttgtgttcaggtcttcttggttctgagtttgttgtgttcaggtcttcttggttctgaatttgttgtgttcaggtcttcttaGTTCTGGGTTTGTTGATTCTACTGTAGATCTCAGCGGGGTCCTTCTCAGCTGCTTGTGCAGCCACGGgtctgaagagagagaaacagaaattaaacaaaatCCACATCCCAAC

Function

NR:

description
PREDICTED: protein RCC2 homolog

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1301574 True 1198 TUCP 0.44 3 8331135 8332518

Neighbor

gene id symbol gene type direction distance location
atpv0e2 va0e2 coding downstream 61445 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 68195 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 130115 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 211992 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 250788 8058941 ~ 8080347 (-)
ncf4 p40phox coding upstream 322588 8655106 ~ 8696718 (-)
LOC110515367 LOC106591437 coding upstream 396705 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 406217 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 537503 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 541516 8874034 ~ 8878068 (-)
G1141435 NA non-coding downstream 11593 8235231 ~ 8319542 (-)
G1141461 NA non-coding downstream 29542 8276630 ~ 8301593 (-)
G1141458 NA non-coding downstream 54704 8276122 ~ 8276431 (-)
G1141476 NA non-coding upstream 6417 8338935 ~ 8340345 (-)
G1141460 NA non-coding upstream 25952 8358470 ~ 8360548 (-)
G1141464 LOC106605908 non-coding upstream 33459 8365977 ~ 8470243 (-)
G1141504 NA non-coding upstream 45043 8377561 ~ 8378822 (-)
G1141516 LOC106605911 non-coding upstream 65687 8398205 ~ 8455438 (-)
G1140367 LOC106601621 other downstream 635389 7409260 ~ 7695746 (-)
G1140368 LOC106591490 other downstream 670814 7659697 ~ 7730493 (-)
LOC110493310 LOC106591489 other downstream 826436 7490185 ~ 7534632 (-)
G1140343 NA other downstream 1084485 7245712 ~ 7246650 (-)
G1141517 NA other upstream 94095 8426613 ~ 8452319 (-)
G1141579 NA other upstream 258447 8590965 ~ 8592898 (-)
G1141636 cbx6 other upstream 461339 8793857 ~ 8797212 (-)

Expression


Co-expression Network