G1141476


Basic Information

Item Value
gene id G1141476
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8338935 ~ 8340345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1301550
TCTGTGGTTTGTTATGTCGACtaggggggtggatctttgctattaAAGATCTCAGTAGCCATAGTGTTGTCACTCAGCGGTTCATGAGAAATGGTGAATCGTTGAAAGTCAttgctattgcaaagctcttattattaaagatgtagtttaagtataactcggACTGGTGTGATAAGTGTGTCTCCTtatttgatagtaaagaaattaaccaccacaccttctttagactagttgagtatctggagcatcagtatttgtgggttcgattatttCTTATTCAAATCTCTTGCTTTTTGGTGAGTATTTCATTAAAGCTGCGTTGTTGGTTTtattaagggcttttaagtaatcatttcactgtaaggttgtattcagtgcatgtgacaaatgaaatgttatttgatttgatgtaatactactcctaaacacaatcCACTATCACTGTGTCTCTTGTTAATACtgctcctaaacacaacccaccatcactgtgtctcatgttaatactactcctaaacacaacccaccatcactgtgtttTATGTTAATGCTACTTCTAAAGCTCTTTTGAAACATCATCTCAATCACTCTTACTCTTACGGTCACTCTTACTTTAGGCCATTTTCAAAATGTCTCCACAGTCTATTGCTCTCAGAGCTTTTAAAATAGCATGCACAAGTCTTTATGTGAAACATGTACAATTCAGGTTAGTATttgtcaagggtgccaataattttggttGTGACTGTATATCCCACATTCAGATAAATATGTACAAAtgaatttacacacacacacacacacacacacttgaccctGATATACTTTGACAGTGAACTTGACCCTATTGAATGGAGATCTGGGTATTACTGGTAAACTCTACTGATCATGTTTTAAACATGCAACTGAATAAACTGAACTAAActaaacacatgaaaacacagtccAGGGTCAGTATTCACAAAGTGTATCAAAGTAGGagagctgatctgggatcagtttagcATTTTAGATCATAATTATATGGACcttctgagacactttatgaatacaggccctgatgtaacaaccaaaacacagtTCAAAATAAATCAACAAGTACAAAGATGACTGAGATGTCATGTATGGCTAAAAACATCAAAACTAAAACTATATTCCAAGATATCGTCAAGTGTACTTACAGAGTGAAGTGAAGGGGAGAGGTCTTGAACAGTTAGTCAACTTACTGTCGCTGCATGGAAACAAGAAGTAGTCTACTGTAAGTATTAGTAGAAGCAGGCGTAGCCTAAGTGCGAGTTCTGTTGTTGACACATTTTAAAAGTAGCCTAGTCAGGGCATTAACATGCAGGAACAGAATGTCACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1301550 True 1361 lncRNA 0.37 2 8338935 8340345

Neighbor

gene id symbol gene type direction distance location
atpv0e2 va0e2 coding downstream 69245 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 75995 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 137915 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 219792 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 258588 8058941 ~ 8080347 (-)
ncf4 p40phox coding upstream 314761 8655106 ~ 8696718 (-)
LOC110515367 LOC106591437 coding upstream 388878 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 398390 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 529676 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 533689 8874034 ~ 8878068 (-)
G1141435 NA non-coding downstream 19393 8235231 ~ 8319542 (-)
G1141461 NA non-coding downstream 37342 8276630 ~ 8301593 (-)
G1141458 NA non-coding downstream 62504 8276122 ~ 8276431 (-)
G1141460 NA non-coding upstream 18125 8358470 ~ 8360548 (-)
G1141464 LOC106605908 non-coding upstream 25632 8365977 ~ 8470243 (-)
G1141504 NA non-coding upstream 37216 8377561 ~ 8378822 (-)
G1141516 LOC106605911 non-coding upstream 57860 8398205 ~ 8455438 (-)
G1141519 NA non-coding upstream 63381 8403726 ~ 8404102 (-)
G1141490 NA other downstream 6417 8331135 ~ 8332518 (-)
G1140367 LOC106601621 other downstream 643189 7409260 ~ 7695746 (-)
G1140368 LOC106591490 other downstream 678614 7659697 ~ 7730493 (-)
LOC110493310 LOC106591489 other downstream 834236 7490185 ~ 7534632 (-)
G1141517 NA other upstream 86268 8426613 ~ 8452319 (-)
G1141579 NA other upstream 250620 8590965 ~ 8592898 (-)
G1141636 cbx6 other upstream 453512 8793857 ~ 8797212 (-)

Expression


Co-expression Network