G1141524


Basic Information

Item Value
gene id G1141524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8418982 ~ 8425533 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1301618
cagagtacaggtgACTAGCATACAGGCTATGTGTTGCTATACAGTGAGTGAGAAGCAATGTTTTCAGATCATGAGCAGGAGATACTGTTTATCACAGTGATGCAGTAGTATTTCAGTCTGTGGACGTTAACTAGTTTAGTACAACATGTCGTCAGCTCACGAAACCGCTGAAATCAATGCACACGATCAGCTATAGCTTACATTTTACAGGTCATCCTGGTCACATTAGTCGGTGTGACTTTCGCCGACAGTCACTATTCAAATGTTGTCCAAAATGTTTCTGCTTATCCTGCCCCCCCCCGTCAAATATATCCTGCCCCCCCTGTCAAATATATCCTGCCCCCCCGTCAAATATATCCTGCCCCCCCAGTCATAT
>TU1301616
gtgtgtttgttgatgAACAGTGCTGATTGTTGATCTATTACAgtttatctcctgacagtaatggaGTATCCCTGGCTGGCCTATAGGCTAGCCACTCATGCATTATGTTGCTCAATGGCGCCATCATGTGTACAATAGGCAGAAATACAAGAAACATAATTGATTTATTTGTTGTCTATTTATTGTCTTAAGCTGAGCTTATTTACAACATGATACTTGTACTgtattcaatgtaaaaaaaaatgaaaaatgtaaTGTATCTAAAATAGGTAATAATTCATAATTTGATAATAAAACAAGCAATATTATGACAtaaaatgccCAATAACATCTGACACCATTACAAAGTAAAACGTATTAAAACAAATCAGGAGAAACTCCAGAGCTAAAATGATTTAAAAGCTCTTATCAATATTATTCATTTTGTGTCACTAAAACAAGCCAATACTTTATCTATTATAAAAAATCTGGAATTGGCTAAATCCCATAGAAAAAGATCAACAATAGATAAGTACACAAGAAAAGTGGGCTATTTATTAAGGGGAGCAGGTCCAGAAAGGAAACCCGAGGGCCCGCCTCAACTGAGAATGGAACCAATTAGAGGCTAGTATCATTCATGACTTCCTTATTGACCTGGTCTGCTCTTACATCCTTCTGCCGCTTGCTGCTACTAAGCGCTGGCTTCTTTTTCTCCATTGACTGCTGCTGTAACTATCTGTTTCTCACTATGCTGCTGATGTCTGATATAATGTTTTCTTTGTAAGTGCTCGCTAGCTGTGTTTAAACCTCACCAGCATCGTTCAATATGCTCATGTTGCAATGTTTGGCTGCTGCGGTGATGTGATTGATTGTGAGGATCAACCATGTTACTGCTCTGTTTTCAGTTAATAGCCGGCGACATGTAGAATTAGCTAAGTAGAATTAGCCTCAGGAGTAGTCAATCATATAGCCTACTTGTTTGTTCCCAATAACAGCTTTCGAGCTGAGTCAATGCACTCCGTGAACCATCATGGAGAATAGTCCTTCATCCATACAAGGAGGAAGAAGCCTGTGCTAGACTAGCATACAGGCTATGTGTTGCTATACAGTGAGTGAGAAGCAATGTTTTCAGATCATGAGCAGGAGATACTGTTTATCACAGTGATGCAGTAGTATTTCAGTCTGTGGACGTTAACTAGTTTAGTACAACATGTCGTCAGCTCACGAAACCGCTGAAATCAATGCACACGATCAGCTATAGCTTACATTTTACAGGTCATCCTGGTCACATTAGTCGGTGTGACTTTCGCCGACAGTCACTATTCAAATGTTGTCCAAAATGTTTCTGCTTATCCTGCCCCCCCCTGTCAAATATATCCTGCCCCCCCCGTCAAATATATCCTGCCCCCCCTGTCAAATATATCCTGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1301618 False 376 lncRNA 0.45 3 8418982 8425533
TU1301616 True 1410 lncRNA 0.39 2 8419268 8420709

Neighbor

gene id symbol gene type direction distance location
atpv0e2 va0e2 coding downstream 149292 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 156042 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 217962 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 299839 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 338635 8058941 ~ 8080347 (-)
ncf4 p40phox coding upstream 229573 8655106 ~ 8696718 (-)
LOC110515367 LOC106591437 coding upstream 303690 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 313202 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 444488 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 448501 8874034 ~ 8878068 (-)
G1141519 NA non-coding downstream 14880 8403726 ~ 8404102 (-)
G1141504 NA non-coding downstream 40160 8377561 ~ 8378822 (-)
G1141462 NA non-coding downstream 48523 8293489 ~ 8370459 (-)
G1141460 NA non-coding downstream 58434 8358470 ~ 8360548 (-)
G1141476 NA non-coding downstream 78637 8338935 ~ 8340345 (-)
G1141527 NA non-coding upstream 11914 8437447 ~ 8437817 (-)
G1141530 NA non-coding upstream 38412 8463945 ~ 8464368 (-)
G1141531 NA non-coding upstream 46520 8472053 ~ 8474297 (-)
G1141532 NA non-coding upstream 49504 8475037 ~ 8475885 (-)
G1141540 LOC106591278 non-coding upstream 79389 8504922 ~ 8516728 (-)
G1141490 NA other downstream 86464 8331135 ~ 8332518 (-)
G1140367 LOC106601621 other downstream 723236 7409260 ~ 7695746 (-)
G1141517 NA other upstream 1080 8426613 ~ 8452319 (-)
G1141579 NA other upstream 165432 8590965 ~ 8592898 (-)
G1141636 cbx6 other upstream 368324 8793857 ~ 8797212 (-)

Expression


Co-expression Network