G1141517


Basic Information

Item Value
gene id G1141517
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8426613 ~ 8452319 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1301607
gttgaattgagattctactttgtctctgtactggcgcttagcttgtttgatagccttgcggagggaatagctgcactgtttgtattcggtcatgttaccagacaccttgccctgattaaaagcagtggttcgcgctttcagtttcacacgaatgctgccatcaatccacggtttctggttagggaatgttttaatcgttgctatgggaacgacatcttcaacgcacgttctaatgaattcgcacaccgaatcagcgtattcgtcaatgttgttatctgacgcaatacgaaacatctcccagtccacgtgatggaagcagtcttggagtgtggagtcagcttggtcggaccagcgttggacagacctcagcgtgggagcctcttgttttagtttctgtctgtaggcagggatcaacaaaatggagtcgtggtcagcttttccgaaaggggggcggggcagggccttatatgcgtcgcggaagttagagtaacaatgatccaaggtctttcctcccctggttgcgcaatcgatatgctgataaaatttggggagtcttgttttcagattagccttgttaaaatccccagctacaatgaatgcagcctccagataaatcgtttccagtttgcagagagttaaataaagttcgttcagagccatcgatgtgtctgcttgggggggatatatatggctgtgattataatcgaagataattctcttggtagataatgtggtctacatttgattgtgaggaattctaaatcaggtgaacagaaggatttgagttcctgtatgtttctttcatcacaccatgtcacgttggccatgaggcatacgcccccgcccctcttcttaccagaaagatgtttgtttctgtcagcgcgatgtgtggagaaacccgttggctgcaccgcttcggatagagtctctccagtgagccatgtttcagtgaagcaaaggacgttacagtctctgatgtccctctggaatgctacccttgctcggatttcatcaaccttgttgtcaagagactggacattggcaagaagaatgctagggagtggtgcgcgctgtgcccgtttccggagtctgaccagaagaccgcctcgtttccctctctttcggagtcgtttttttgggtcgctgcataggatccactccgttgtcctgtttgtaaggcagaacacaggatccgcgtcgcgaaaaacatattcttggtcgtactgatggtgagttgatgctgatcttatattcagtagttcttctcgactgtatgtaatgaaacctaagatgacctggggtactaatgtaagaaataacacgtaaaaaaacaaaaaactgcatagtttcctaggaacgcgaagcgaggcggccatctctgtcggcgccggaaggcGAGATCTCAGGGAACAATGAGTTGTCACTAGGGGGTCAACTGTTTTGCTTATTGATGACATCATTGTCTACTCTTTCAATAAACAGCAGCATATGAATGCCCTTGATGATGTCTGTGAGTTCAGTGTTCTAGTATTGACTCTGTTGTAATGGCAGAAAACATTCACCGGGTGGCAGCACTGGGGCGGCTGAATTTCACAGCAGCATACTGGACATCCTCGTCCTGAATCTGGGGCTGAGGCAGCTGGAcggtggagtatagagacactTCCTGGTTTTTGGAGCCAGAGAAGTGGACGCTGGCATAGTGAACATCATCCTGGTTGTCTGTGTCAGCTGTCTGTGCTGCAGTAGAGGTCATGGCCATGCTTGAGATGTTGTCATACACTGGACTAGAGTCTCCCTGATGGAGAgagaggacagacaACATAAGGAGTAGAAATGTTCCACAAAGAATACACAGTCACCTTCTGTTTCCAACAGACTCACCTGTACATTCTCTGATGTATCTCTTGTGTCAGAGGTGGATTTGGAGGCCTTCT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1301607 True 1937 TUCP 0.47 2 8426613 8452319

Neighbor

gene id symbol gene type direction distance location
atpv0e2 va0e2 coding downstream 156923 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 163673 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 225593 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 307470 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 346266 8058941 ~ 8080347 (-)
ncf4 p40phox coding upstream 202787 8655106 ~ 8696718 (-)
LOC110515367 LOC106591437 coding upstream 276904 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 286416 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 417702 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 421715 8874034 ~ 8878068 (-)
G1141524 NA non-coding downstream 1080 8418982 ~ 8425533 (-)
G1141519 NA non-coding downstream 22511 8403726 ~ 8404102 (-)
G1141504 NA non-coding downstream 47791 8377561 ~ 8378822 (-)
G1141462 NA non-coding downstream 56154 8293489 ~ 8370459 (-)
G1141460 NA non-coding downstream 66065 8358470 ~ 8360548 (-)
G1141530 NA non-coding upstream 11626 8463945 ~ 8464368 (-)
G1141531 NA non-coding upstream 19734 8472053 ~ 8474297 (-)
G1141532 NA non-coding upstream 22718 8475037 ~ 8475885 (-)
G1141540 LOC106591278 non-coding upstream 52603 8504922 ~ 8516728 (-)
G1141580 NA non-coding upstream 147077 8599396 ~ 8599690 (-)
G1141490 NA other downstream 94095 8331135 ~ 8332518 (-)
G1140367 LOC106601621 other downstream 730867 7409260 ~ 7695746 (-)
G1140368 LOC106591490 other downstream 766292 7659697 ~ 7730493 (-)
LOC110493310 LOC106591489 other downstream 921914 7490185 ~ 7534632 (-)
G1141579 NA other upstream 138646 8590965 ~ 8592898 (-)
G1141636 cbx6 other upstream 341538 8793857 ~ 8797212 (-)
LOC110494947 NA other upstream 507988 8960307 ~ 8972481 (-)

Expression


Co-expression Network