G1141531



Basic Information


Item Value
gene id G1141531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8472053 ~ 8474297 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1301625
GTAGATGGTGAGGAGCTGAGCTCCAGCAGTCAGGACAGCCCCCACCCAGACCACATGAACCCAGGGAAACACTGCTGCAGGATTTACTGGGTTTAAGTGTCAAGAGGTTAGAACATATATCTGTTTGTAGTTGTATtcattatggatcctcattagcaAAATTTAGGCAGTAAAATTAAGGCAATTATTCCATTTTAAAATCATTACAATGCATTCACTACAGATTGCACAACACATTATGTATATGACCTTAGGCCcatactctactaccacatatctagaacacaaaatccatgttgtACATGTGTTTATAGTGCTTATCTGTTAAAACAGTTGAGGGAcaatcatatttgcatATGCTTTGAGTGTGACGTCCACTTCTGCTTTAGTTCCGTATCTATTCCCAAGCTGTGTTGAATGGGCTTCAAGAAtatcagccccagaaactagaatatgcatataattgtcagaataggatagaaaacactcaagtttccaaaactgtcaaaatattgtctattCCAttaagcaaggcagttaacccccagcCACAGAAAAAGAGCAGAAGTATAATATTAATCTACAGAGAGTAAACAGAAAAGCTTTATGTGTTACAGAGAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1301625 True 622 lncRNA 0.38 2 8472053 8474297

Neighbor


gene id symbol gene type direction distance location
atpv0e2 va0e2 coding downstream 202363 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 209113 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 271033 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 352910 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 391706 8058941 ~ 8080347 (-)
ncf4 p40phox coding upstream 180809 8655106 ~ 8696718 (-)
LOC110515367 LOC106591437 coding upstream 254926 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 264438 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 395724 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 399737 8874034 ~ 8878068 (-)
G1141466 NA non-coding downstream 115 8415698 ~ 8471938 (-)
G1141464 LOC106605908 non-coding downstream 1810 8365977 ~ 8470243 (-)
G1141530 NA non-coding downstream 7685 8463945 ~ 8464368 (-)
G1141522 NA non-coding downstream 8163 8410602 ~ 8463890 (-)
G1141516 LOC106605911 non-coding downstream 16615 8398205 ~ 8455438 (-)
G1141532 NA non-coding upstream 740 8475037 ~ 8475885 (-)
G1141540 LOC106591278 non-coding upstream 30625 8504922 ~ 8516728 (-)
G1141580 NA non-coding upstream 125099 8599396 ~ 8599690 (-)
G1141582 NA non-coding upstream 133208 8607505 ~ 8612332 (-)
G1141588 NA non-coding upstream 145618 8619915 ~ 8620219 (-)
G1141517 NA other downstream 19734 8426613 ~ 8452319 (-)
G1141490 NA other downstream 139535 8331135 ~ 8332518 (-)
G1140368 LOC106591490 other downstream 811732 7659697 ~ 7730493 (-)
LOC110493310 LOC106591489 other downstream 967354 7490185 ~ 7534632 (-)
G1141579 NA other upstream 116668 8590965 ~ 8592898 (-)
G1141636 cbx6 other upstream 319560 8793857 ~ 8797212 (-)
LOC110494947 NA other upstream 486010 8960307 ~ 8972481 (-)

Expression



Co-expression Network