Gene
RNA
| Item | Value |
|---|---|
| gene id | G1141169 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 9264246 ~ 9265315 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1301154 | True | 386 | lncRNA | 0.45 | 2 | 9264246 | 9265315 |
9,261,200
9,261,600
9,262,000
9,262,400
9,262,800
9,263,200
9,263,600
9,264,000
9,264,400
9,264,400
9,264,800
9,265,200
9,265,600
9,266,000
9,266,400
9,266,800
9,267,200
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487257 | tmprss6 | coding | upstream | 41355 | 9208432 ~ 9222891 (+) |
| LOC110495071 | LOC106564380 | coding | upstream | 61049 | 9192677 ~ 9203197 (+) |
| LOC110495073 | LOC106564390 | coding | upstream | 89269 | 9123538 ~ 9175830 (+) |
| LOC110513456 | LOC106564390 | coding | upstream | 90956 | 9156337 ~ 9173290 (+) |
| LOC110494915 | LOC106564391 | coding | upstream | 141106 | 9120078 ~ 9123140 (+) |
| LOC118938198 | cacng2 | coding | downstream | 153198 | 9418513 ~ 9512130 (+) |
| LOC118938199 | NA | coding | downstream | 183088 | 9448403 ~ 9449765 (+) |
| LOC118936367 | LOC106564430 | coding | downstream | 279971 | 9545143 ~ 9562471 (+) |
| cuta | cuta | coding | downstream | 297439 | 9562754 ~ 9568616 (+) |
| LOC110494920 | LOC106596927 | coding | downstream | 348197 | 9613512 ~ 9614354 (+) |
| G1141160 | NA | non-coding | upstream | 62197 | 9201481 ~ 9202049 (+) |
| G1141158 | NA | non-coding | upstream | 65543 | 9198409 ~ 9198703 (+) |
| G1141154 | NA | non-coding | upstream | 69246 | 9164369 ~ 9195000 (+) |
| G1141152 | NA | non-coding | upstream | 71988 | 9162083 ~ 9192258 (+) |
| G1141170 | NA | non-coding | downstream | 1352 | 9266667 ~ 9268322 (+) |
| G1141194 | NA | non-coding | downstream | 66708 | 9332023 ~ 9333973 (+) |
| G1141205 | NA | non-coding | downstream | 88708 | 9354023 ~ 9357118 (+) |
| G1141231 | NA | non-coding | downstream | 138664 | 9403979 ~ 9405457 (+) |
| G1141275 | LOC106564432 | non-coding | downstream | 255106 | 9520421 ~ 9522122 (+) |
| G1141017 | LOC106564394 | other | upstream | 168766 | 9049219 ~ 9095480 (+) |
| LOC110487255 | LOC106591397 | other | upstream | 423451 | 8828237 ~ 8840946 (+) |
| cbx6a | cbx6 | other | upstream | 470201 | 8790681 ~ 8810954 (+) |
| G1140953 | NA | other | upstream | 569371 | 8641148 ~ 8694875 (+) |
| LOC118938189 | LOC106591430 | other | upstream | 677057 | 8570729 ~ 8594285 (+) |
| G1141316 | NA | other | downstream | 358284 | 9623599 ~ 9624826 (+) |
| LOC118938200 | cyh2 | other | downstream | 388798 | 9653992 ~ 9668271 (+) |
| LOC118938204 | NA | other | downstream | 746012 | 10011327 ~ 10015855 (+) |
