G1142154


Basic Information

Item Value
gene id G1142154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 10037323 ~ 10037681 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1302488
atactcactacctctccatgtatatatatactcactacctctccatctatgtctatactcactacctctccatctatatatatactcactacctctccatctatatatatactcactacctctccatctatatatactcactccctctccatctatatatatactcactacctctccatctatatatactcactacctctccatctatatatatactcactacctctccatctatgtatatactcactacctctccatctatatatatactcactacctctccatctatatatatactcactacctctccatctatatatatactcactacctctccatctatgtatatactcactacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572711

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1302488 True 359 lncRNA 0.35 1 10037323 10037681

Neighbor

gene id symbol gene type direction distance location
LOC118938202 LOC106592503 coding downstream 337851 9695450 ~ 9699472 (-)
LOC118938201 LOC106590876 coding downstream 342303 9671928 ~ 9695020 (-)
LOC118936521 LOC107087645 coding downstream 385168 9630367 ~ 9652155 (-)
LOC118938528 LOC106564434 coding downstream 457072 9575964 ~ 9580251 (-)
LOC110485557 rayl coding downstream 498067 9520385 ~ 9539256 (-)
lgals2b LOC106590712 coding upstream 60266 10097922 ~ 10102555 (-)
LOC110516362 LOC106590757 coding upstream 276042 10313723 ~ 10322183 (-)
LOC110487259 LOC106593718 coding upstream 596468 10634149 ~ 10657332 (-)
LOC110485344 trmt1 coding upstream 659345 10697026 ~ 10717367 (-)
LOC110487189 LOC106590640 coding upstream 703124 10740805 ~ 10762367 (-)
G1142134 NA non-coding downstream 30190 10006601 ~ 10007133 (-)
G1142131 NA non-coding downstream 38825 9998286 ~ 9998498 (-)
G1142117 NA non-coding downstream 57706 9979359 ~ 9979617 (-)
G1142116 NA non-coding downstream 58257 9978788 ~ 9979066 (-)
G1142114 NA non-coding downstream 61018 9975647 ~ 9976305 (-)
G1142155 NA non-coding upstream 749 10038430 ~ 10038788 (-)
G1142159 NA non-coding upstream 3695 10041376 ~ 10041640 (-)
G1142546 NA non-coding upstream 34949 10072630 ~ 10074228 (-)
G1142553 LOC106590723 non-coding upstream 68735 10106416 ~ 10106887 (-)
G1142569 NA non-coding upstream 110040 10147721 ~ 10148130 (-)
G1142121 NA other downstream 55057 9980348 ~ 9982266 (-)
G1141973 cyh2 other downstream 368141 9666379 ~ 9669182 (-)
LOC110485597 LOC106590780 other downstream 656274 9356000 ~ 9385805 (-)
G1141790 NA other downstream 821025 9215140 ~ 9216298 (-)
LOC110494947 NA other downstream 1071615 8960307 ~ 8972481 (-)
G1142620 NA other upstream 258063 10295744 ~ 10299367 (-)
G1142757 NA other upstream 526779 10564460 ~ 10566465 (-)
LOC110494931 cacna1a other upstream 782743 10780341 ~ 10913542 (-)
G1143380 NA other upstream 1120205 11157886 ~ 11159261 (-)

Expression


Co-expression Network