Gene
RNA
| Item | Value |
|---|---|
| gene id | G1142546 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 10072630 ~ 10074228 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1302959 | True | 229 | lncRNA | 0.54 | 2 | 10072630 | 10074228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938202 | LOC106592503 | coding | downstream | 373158 | 9695450 ~ 9699472 (-) |
| LOC118938201 | LOC106590876 | coding | downstream | 377610 | 9671928 ~ 9695020 (-) |
| LOC118936521 | LOC107087645 | coding | downstream | 420475 | 9630367 ~ 9652155 (-) |
| LOC118938528 | LOC106564434 | coding | downstream | 492379 | 9575964 ~ 9580251 (-) |
| LOC110485557 | rayl | coding | downstream | 533374 | 9520385 ~ 9539256 (-) |
| lgals2b | LOC106590712 | coding | upstream | 23719 | 10097922 ~ 10102555 (-) |
| LOC110516362 | LOC106590757 | coding | upstream | 239495 | 10313723 ~ 10322183 (-) |
| LOC110487259 | LOC106593718 | coding | upstream | 559921 | 10634149 ~ 10657332 (-) |
| LOC110485344 | trmt1 | coding | upstream | 622798 | 10697026 ~ 10717367 (-) |
| LOC110487189 | LOC106590640 | coding | upstream | 666577 | 10740805 ~ 10762367 (-) |
| G1142159 | NA | non-coding | downstream | 30990 | 10041376 ~ 10041640 (-) |
| G1142155 | NA | non-coding | downstream | 33842 | 10038430 ~ 10038788 (-) |
| G1142154 | NA | non-coding | downstream | 34949 | 10037323 ~ 10037681 (-) |
| G1142134 | NA | non-coding | downstream | 65497 | 10006601 ~ 10007133 (-) |
| G1142131 | NA | non-coding | downstream | 74132 | 9998286 ~ 9998498 (-) |
| G1142553 | LOC106590723 | non-coding | upstream | 32188 | 10106416 ~ 10106887 (-) |
| G1142569 | NA | non-coding | upstream | 73493 | 10147721 ~ 10148130 (-) |
| G1142633 | NA | non-coding | upstream | 176499 | 10250727 ~ 10252238 (-) |
| G1142642 | NA | non-coding | upstream | 195858 | 10270086 ~ 10270445 (-) |
| G1142646 | NA | non-coding | upstream | 205266 | 10279494 ~ 10280272 (-) |
| G1142121 | NA | other | downstream | 90364 | 9980348 ~ 9982266 (-) |
| G1141973 | cyh2 | other | downstream | 403448 | 9666379 ~ 9669182 (-) |
| LOC110485597 | LOC106590780 | other | downstream | 691581 | 9356000 ~ 9385805 (-) |
| G1141790 | NA | other | downstream | 856332 | 9215140 ~ 9216298 (-) |
| LOC110494947 | NA | other | downstream | 1106922 | 8960307 ~ 8972481 (-) |
| G1142620 | NA | other | upstream | 221516 | 10295744 ~ 10299367 (-) |
| G1142757 | NA | other | upstream | 490232 | 10564460 ~ 10566465 (-) |
| LOC110494931 | cacna1a | other | upstream | 746196 | 10780341 ~ 10913542 (-) |
| G1143380 | NA | other | upstream | 1083658 | 11157886 ~ 11159261 (-) |
