G1142354


Basic Information

Item Value
gene id G1142354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 10585799 ~ 10587339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1302715
GTGTCCCAATTCCCCCAGGTCTTCCTGgtcttgtctcctctctcagaTTCATCACTTTCTCCAATACACTCTATATCACACCAACAGATTCATCACATTCTCCAATACACTCTATATCACACTAATAGATTCATCACTTTCTCCAATACACTCTATATCACACCAACAGATTCATCACATTCTCCAATACACTCTATATCACACCAACAGATTCATCCCATTCTCCAATACACTCTATATCACACCAACAGATTCATCACTTTCTCCAATACACTCTATATCACACCAACAGATTCATCACATTCTCCAATACACTCTATATCACACCAACAGATTCATCACTTTCCCCAATACACTCTATATCACACCAACATATTCATCACATTCCCCAATACACTCTATATCACACC
>TU1302716
GTGTCCCAATTCCCCCAGGTCTTCCTGgtcttgtctcctctctcagaTTCATCACTTTCTCCAATACACTCTATATCACACCAACAGATTCATCACATTCTCCAATACACTCTATATCACACTAATAGATTCATCACTTTCTCCAATACACTCTATATCACACCAACAGATTCATCACTTTCTCCAATACACTCTATATCACACCAATAGATTCATCACTTTCTCCAATACACTCTATATCACACCAACAGATTCATCACTTTCTCCAATACACTCTATATCACACCAACAGATTCATCCCATTCTCCAATACACTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1302715 False 410 lncRNA 0.39 2 10585799 10586413
TU1302716 True 320 lncRNA 0.38 3 10585799 10587339
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110512091 LOC106590790 coding upstream 471242 10103316 ~ 10114557 (+)
LOC118936522 LOC106590702 coding upstream 492396 10088482 ~ 10093403 (+)
zgc:92360 LOC106564422 coding upstream 497995 10053959 ~ 10087804 (+)
LOC118938204 NA coding upstream 569944 10011327 ~ 10015855 (+)
LOC110493424 LOC106564439 coding upstream 586729 9975889 ~ 10004759 (+)
LOC118936325 NA coding downstream 74248 10661587 ~ 10670450 (+)
LOC110512270 LOC106593677 coding downstream 84859 10672198 ~ 10682184 (+)
LOC110485343 LOC101448032 coding downstream 94947 10682286 ~ 10694924 (+)
LOC110485345 LOC106593639 coding downstream 129912 10717251 ~ 10732453 (+)
LOC118938430 ier2 coding downstream 180369 10767708 ~ 10769374 (+)
G1142347 NA non-coding upstream 16417 10565217 ~ 10569382 (+)
G1142333 NA non-coding upstream 48893 10535579 ~ 10536906 (+)
G1142322 NA non-coding upstream 100746 10479905 ~ 10485053 (+)
G1142316 NA non-coding upstream 115993 10469254 ~ 10469806 (+)
G1142298 NA non-coding upstream 169706 10414551 ~ 10416093 (+)
G1142364 NA non-coding downstream 22665 10610004 ~ 10610332 (+)
G1142367 NA non-coding downstream 28240 10615579 ~ 10615860 (+)
G1142387 NA non-coding downstream 59254 10646593 ~ 10647830 (+)
G1142398 NA non-coding downstream 79814 10667153 ~ 10667813 (+)
G1142408 NA non-coding downstream 125178 10712517 ~ 10713747 (+)
G1142240 NA other upstream 286435 10296253 ~ 10299364 (+)
G1142146 NA other upstream 559565 10026017 ~ 10026234 (+)
LOC118938200 cyh2 other upstream 923277 9653992 ~ 9668271 (+)
G1141316 NA other upstream 960973 9623599 ~ 9624826 (+)
G1142381 NA other downstream 232401 10819740 ~ 10823255 (+)
G1142457 NA other downstream 308586 10895925 ~ 10896973 (+)
G1142964 NA other downstream 617556 11204895 ~ 11205243 (+)
LOC110485562 LOC106590570 other downstream 629340 11216669 ~ 11273353 (+)
G1143059 LOC106564453 other downstream 845399 11432738 ~ 11435550 (+)

Expression

G1142354 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G1142354 Expression in each Bioproject

Bar chart with 6 bars.
G1142354 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
End of interactive chart.

Co-expression Network