Gene
RNA
| Item | Value |
|---|---|
| gene id | G1142776 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 10617202 ~ 10617475 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1303235 | True | 274 | lncRNA | 0.40 | 1 | 10617202 | 10617475 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516362 | LOC106590757 | coding | downstream | 295019 | 10313723 ~ 10322183 (-) |
| lgals2b | LOC106590712 | coding | downstream | 514647 | 10097922 ~ 10102555 (-) |
| LOC118938203 | NA | coding | downstream | 542581 | 10015869 ~ 10074621 (-) |
| LOC118938202 | LOC106592503 | coding | downstream | 917730 | 9695450 ~ 9699472 (-) |
| LOC118938201 | LOC106590876 | coding | downstream | 922182 | 9671928 ~ 9695020 (-) |
| LOC110487259 | LOC106593718 | coding | upstream | 16674 | 10634149 ~ 10657332 (-) |
| LOC110485344 | trmt1 | coding | upstream | 79551 | 10697026 ~ 10717367 (-) |
| LOC110487189 | LOC106590640 | coding | upstream | 123330 | 10740805 ~ 10762367 (-) |
| LOC110494931 | cacna1a | coding | upstream | 162866 | 10780341 ~ 10913542 (-) |
| LOC118938429 | NA | coding | upstream | 364207 | 10981682 ~ 11101213 (-) |
| G1142728 | NA | non-coding | downstream | 132170 | 10479911 ~ 10485032 (-) |
| G1142727 | NA | non-coding | downstream | 137878 | 10478337 ~ 10479324 (-) |
| G1142724 | NA | non-coding | downstream | 141966 | 10474606 ~ 10475236 (-) |
| G1142670 | NA | non-coding | downstream | 262335 | 10354481 ~ 10354867 (-) |
| G1142620 | NA | non-coding | downstream | 317835 | 10295744 ~ 10299367 (-) |
| G1142783 | NA | non-coding | upstream | 29304 | 10646779 ~ 10647803 (-) |
| G1142506 | NA | non-coding | upstream | 53295 | 10670770 ~ 10671856 (-) |
| G1142798 | LOC106593677 | non-coding | upstream | 54513 | 10671988 ~ 10672980 (-) |
| G1142797 | NA | non-coding | upstream | 55826 | 10673301 ~ 10675541 (-) |
| G1142757 | NA | other | downstream | 50737 | 10564460 ~ 10566465 (-) |
| G1142121 | NA | other | downstream | 634936 | 9980348 ~ 9982266 (-) |
| G1141973 | cyh2 | other | downstream | 948020 | 9666379 ~ 9669182 (-) |
| G1143380 | NA | other | upstream | 540411 | 11157886 ~ 11159261 (-) |
| G1143449 | NA | other | upstream | 663587 | 11281062 ~ 11282092 (-) |
| LOC110485554 | LOC106590435 | other | upstream | 810215 | 11425756 ~ 11429422 (-) |
| LOC118938427 | LOC106564452 | other | upstream | 838099 | 11447021 ~ 11494371 (-) |
