G1142513


Basic Information

Item Value
gene id G1142513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 10732106 ~ 10732517 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1302923
gtcctcctctcctctcagagacagactgtcctcctctcctctcagagacagactgtcctcctctcctctcagagacagactgtcctcctctctgtctctgtcctgtcagCCACTCACTATTTTTCCCTTTAAGGCAGCGCTTgacaaatgcattaaaaaaaaagtgCAAATTTCTCATCCTActcacttctctctttctctctgtcagtgATAGAACTTGGTGAAGTCCCCAAGGATCATACCATGTGGTTAACAAAAGGAGGGGTGGGCTCCAGACCTCCCCACCACCCACCCGTCCAGGCCAAATGGAAGCTCTAGTAGTGCCTGCCCGTTACACTTTTAAAACCTGGGCTCTTCTTTGACAGTTAGCCTTTTTATAGAAACACTCTAAAacctcaatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1302923 True 412 lncRNA 0.46 1 10732106 10732517

Neighbor

gene id symbol gene type direction distance location
LOC110485344 trmt1 coding downstream 14739 10697026 ~ 10717367 (-)
LOC110487259 LOC106593718 coding downstream 74774 10634149 ~ 10657332 (-)
LOC110516362 LOC106590757 coding downstream 409923 10313723 ~ 10322183 (-)
lgals2b LOC106590712 coding downstream 629551 10097922 ~ 10102555 (-)
LOC118938203 NA coding downstream 657485 10015869 ~ 10074621 (-)
LOC110487189 LOC106590640 coding upstream 8288 10740805 ~ 10762367 (-)
LOC110494931 cacna1a coding upstream 47824 10780341 ~ 10913542 (-)
LOC118938429 NA coding upstream 249165 10981682 ~ 11101213 (-)
LOC118938431 LOC106564445 coding upstream 375029 11107546 ~ 11110630 (-)
LOC110485570 LOC106590535 coding upstream 382618 11115135 ~ 11116092 (-)
G1142804 NA non-coding downstream 15345 10715842 ~ 10716761 (-)
G1142801 NA non-coding downstream 42916 10688162 ~ 10689190 (-)
G1142800 LOC106593677 non-coding downstream 49945 10680396 ~ 10682161 (-)
G1142797 NA non-coding downstream 56565 10673301 ~ 10675541 (-)
G1142798 LOC106593677 non-coding downstream 59126 10671988 ~ 10672980 (-)
G1142510 NA non-coding upstream 588 10733105 ~ 10733554 (-)
G1142502 NA non-coding upstream 1395 10733912 ~ 10738270 (-)
G1142500 NA non-coding upstream 6985 10739502 ~ 10740062 (-)
G1142515 NA non-coding upstream 81506 10814023 ~ 10843369 (-)
G1142757 NA other downstream 165641 10564460 ~ 10566465 (-)
G1142620 NA other downstream 432739 10295744 ~ 10299367 (-)
G1142121 NA other downstream 749840 9980348 ~ 9982266 (-)
G1141973 cyh2 other downstream 1062924 9666379 ~ 9669182 (-)
G1143380 NA other upstream 425369 11157886 ~ 11159261 (-)
G1143449 NA other upstream 548545 11281062 ~ 11282092 (-)
LOC110485554 LOC106590435 other upstream 695173 11425756 ~ 11429422 (-)
LOC118938427 LOC106564452 other upstream 723057 11447021 ~ 11494371 (-)

Expression


Co-expression Network