Gene
RNA
| Item | Value |
|---|---|
| gene id | G1142893 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 10997302 ~ 10997549 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1303374 | True | 248 | lncRNA | 0.46 | 1 | 10997302 | 10997549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494931 | cacna1a | coding | downstream | 83760 | 10780341 ~ 10913542 (-) |
| LOC110487189 | LOC106590640 | coding | downstream | 234935 | 10740805 ~ 10762367 (-) |
| LOC110485344 | trmt1 | coding | downstream | 279935 | 10697026 ~ 10717367 (-) |
| LOC110487259 | LOC106593718 | coding | downstream | 339970 | 10634149 ~ 10657332 (-) |
| LOC110516362 | LOC106590757 | coding | downstream | 675119 | 10313723 ~ 10322183 (-) |
| LOC118938431 | LOC106564445 | coding | upstream | 109997 | 11107546 ~ 11110630 (-) |
| LOC110485570 | LOC106590535 | coding | upstream | 117586 | 11115135 ~ 11116092 (-) |
| LOC118938432 | NA | coding | upstream | 234936 | 11218089 ~ 11233755 (-) |
| LOC110485558 | LOC106590506 | coding | upstream | 326094 | 11323643 ~ 11359141 (-) |
| LOC110485554 | LOC106590435 | coding | upstream | 428207 | 11425756 ~ 11429422 (-) |
| G1142844 | NA | non-coding | downstream | 27834 | 10968411 ~ 10969468 (-) |
| G1142845 | NA | non-coding | downstream | 29957 | 10966002 ~ 10967345 (-) |
| G1142880 | NA | non-coding | downstream | 52254 | 10944517 ~ 10945048 (-) |
| G1142874 | NA | non-coding | downstream | 58544 | 10937790 ~ 10938758 (-) |
| G1142867 | NA | non-coding | downstream | 66633 | 10929368 ~ 10930669 (-) |
| G1142894 | NA | non-coding | upstream | 999 | 10998548 ~ 10998806 (-) |
| G1142919 | NA | non-coding | upstream | 5587 | 11003136 ~ 11054639 (-) |
| G1142936 | NA | non-coding | upstream | 46610 | 11044159 ~ 11046108 (-) |
| G1143382 | NA | non-coding | upstream | 65449 | 11062998 ~ 11063291 (-) |
| G1143383 | NA | non-coding | upstream | 66119 | 11063668 ~ 11063931 (-) |
| G1142757 | NA | other | downstream | 430837 | 10564460 ~ 10566465 (-) |
| G1142620 | NA | other | downstream | 697935 | 10295744 ~ 10299367 (-) |
| lgals2b | LOC106590712 | other | downstream | 894784 | 10097922 ~ 10102555 (-) |
| G1142121 | NA | other | downstream | 1015036 | 9980348 ~ 9982266 (-) |
| G1143380 | NA | other | upstream | 160337 | 11157886 ~ 11159261 (-) |
| G1143449 | NA | other | upstream | 283513 | 11281062 ~ 11282092 (-) |
| LOC118938427 | LOC106564452 | other | upstream | 458025 | 11447021 ~ 11494371 (-) |
| LOC110485539 | cxcl12b | other | upstream | 802921 | 11797902 ~ 11811263 (-) |
