Gene
RNA
| Item | Value |
|---|---|
| gene id | G1143384 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 11066877 ~ 11067123 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1303985 | True | 247 | lncRNA | 0.45 | 1 | 11066877 | 11067123 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494931 | cacna1a | coding | downstream | 153335 | 10780341 ~ 10913542 (-) |
| LOC110487189 | LOC106590640 | coding | downstream | 304510 | 10740805 ~ 10762367 (-) |
| LOC110485344 | trmt1 | coding | downstream | 349510 | 10697026 ~ 10717367 (-) |
| LOC110487259 | LOC106593718 | coding | downstream | 409545 | 10634149 ~ 10657332 (-) |
| LOC110516362 | LOC106590757 | coding | downstream | 744694 | 10313723 ~ 10322183 (-) |
| LOC118938431 | LOC106564445 | coding | upstream | 40423 | 11107546 ~ 11110630 (-) |
| LOC110485570 | LOC106590535 | coding | upstream | 48012 | 11115135 ~ 11116092 (-) |
| LOC118938432 | NA | coding | upstream | 165362 | 11218089 ~ 11233755 (-) |
| LOC110485558 | LOC106590506 | coding | upstream | 256520 | 11323643 ~ 11359141 (-) |
| LOC110485554 | LOC106590435 | coding | upstream | 358633 | 11425756 ~ 11429422 (-) |
| G1143383 | NA | non-coding | downstream | 2946 | 11063668 ~ 11063931 (-) |
| G1143382 | NA | non-coding | downstream | 3586 | 11062998 ~ 11063291 (-) |
| G1142919 | NA | non-coding | downstream | 12238 | 11003136 ~ 11054639 (-) |
| G1142936 | NA | non-coding | downstream | 20769 | 11044159 ~ 11046108 (-) |
| G1142894 | NA | non-coding | downstream | 68071 | 10998548 ~ 10998806 (-) |
| G1143385 | NA | non-coding | upstream | 563 | 11067686 ~ 11067916 (-) |
| G1143387 | NA | non-coding | upstream | 9795 | 11076918 ~ 11077209 (-) |
| G1143388 | NA | non-coding | upstream | 29502 | 11096625 ~ 11096930 (-) |
| G1143378 | LOC106592053 | non-coding | upstream | 36731 | 11103854 ~ 11157192 (-) |
| G1143398 | LOC106564447 | non-coding | upstream | 59910 | 11127033 ~ 11128124 (-) |
| G1142757 | NA | other | downstream | 500412 | 10564460 ~ 10566465 (-) |
| G1142620 | NA | other | downstream | 767510 | 10295744 ~ 10299367 (-) |
| lgals2b | LOC106590712 | other | downstream | 964359 | 10097922 ~ 10102555 (-) |
| G1142121 | NA | other | downstream | 1084611 | 9980348 ~ 9982266 (-) |
| G1143380 | NA | other | upstream | 90763 | 11157886 ~ 11159261 (-) |
| G1143449 | NA | other | upstream | 213939 | 11281062 ~ 11282092 (-) |
| LOC118938427 | LOC106564452 | other | upstream | 388451 | 11447021 ~ 11494371 (-) |
| LOC110485539 | cxcl12b | other | upstream | 733347 | 11797902 ~ 11811263 (-) |
