Gene
RNA
| Item | Value |
|---|---|
| gene id | G1143517 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 11473937 ~ 11474530 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1304144 | True | 237 | lncRNA | 0.58 | 3 | 11473937 | 11474530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485550 | LOC106564453 | coding | downstream | 27285 | 11434632 ~ 11446652 (-) |
| LOC110485554 | LOC106590435 | coding | downstream | 44515 | 11425756 ~ 11429422 (-) |
| LOC110485558 | LOC106590506 | coding | downstream | 114796 | 11323643 ~ 11359141 (-) |
| LOC118938432 | NA | coding | downstream | 240182 | 11218089 ~ 11233755 (-) |
| LOC110485570 | LOC106590535 | coding | downstream | 357845 | 11115135 ~ 11116092 (-) |
| LOC110485537 | mcrip2 | coding | upstream | 232044 | 11706574 ~ 11712341 (-) |
| LOC110485529 | LOC106589785 | coding | upstream | 238928 | 11713458 ~ 11722106 (-) |
| LOC110485542 | LOC106564456 | coding | upstream | 249196 | 11723726 ~ 11732449 (-) |
| LOC118938530 | NA | coding | upstream | 261834 | 11736364 ~ 11737076 (-) |
| LOC110485539 | cxcl12b | coding | upstream | 323372 | 11797902 ~ 11811263 (-) |
| G1143485 | NA | non-coding | downstream | 84873 | 11388863 ~ 11389064 (-) |
| G1143471 | NA | non-coding | downstream | 142476 | 11330886 ~ 11331461 (-) |
| G1143441 | NA | non-coding | downstream | 212397 | 11261073 ~ 11261540 (-) |
| G1143437 | NA | non-coding | downstream | 226707 | 11246984 ~ 11247230 (-) |
| G1143521 | NA | non-coding | upstream | 5862 | 11480392 ~ 11486014 (-) |
| G1143568 | NA | non-coding | upstream | 91544 | 11566074 ~ 11572819 (-) |
| G1143588 | NA | non-coding | upstream | 141268 | 11615798 ~ 11617512 (-) |
| G1143643 | NA | non-coding | upstream | 271932 | 11746462 ~ 11749253 (-) |
| G1143449 | NA | other | downstream | 191845 | 11281062 ~ 11282092 (-) |
| G1143380 | NA | other | downstream | 314676 | 11157886 ~ 11159261 (-) |
| LOC110494931 | cacna1a | other | downstream | 651570 | 10780341 ~ 10913542 (-) |
| G1142757 | NA | other | downstream | 907472 | 10564460 ~ 10566465 (-) |
| G1143743 | NA | other | upstream | 477065 | 11951595 ~ 11952568 (-) |
| G1143771 | NA | other | upstream | 568578 | 12043108 ~ 12081882 (-) |
| LOC110485629 | NA | other | upstream | 883863 | 12358008 ~ 12366285 (-) |
| G1144335 | LOC106564512 | other | upstream | 1140446 | 12614976 ~ 12615559 (-) |
