G1143104


Basic Information

Item Value
gene id G1143104
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 11797914 ~ 11801442 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1303650
ttatatgTTTATTGAAAAAGAGGGTGAGTATCATATCGGTATCATATTGCCCCTTGGTTTATACAAACAGTGAACATACAGAGTTGAATTAAACAATCCCTCGTAGATGAAGGATACTTGTGTCGTAAGCTGCCTCAAAAGAATTGAAGGTTTTAACATGTAATTCACATTGTCTGGGGAGAGCACCCATACAGAACAAATACACTTCTGACAAAACACATTTCCACTTGGGATGTTATTGCTTAATGCAATGATTTATTTGCACATGTGGTCCAAATAACAGATATGATAAGTAAAATGGTAACAGCCATGTTGTTTGGTTTGGTTGTGGATCTAACTGTAGCATGGCATTGAACAGAATGGTTCTCAAACACTTAAATAATCACCAAATTCCCTTCCTTTATGACAAACCTTACAACGATGTGATACAGATACTTAATAACCTCTGGACCAAAACACCTGCACTTAGCTCACAGACTAAGATGCCTGGAGATTTGAATGGACCTGGAGCTCTATTTTGACAGTAGAAAAACAATGGcaacagtaaaacagtatagaaaCCCACATCATTGAGGAATGGCTATATCTGGGAGGGAGGGGCTTGATTGAAAACATGTGTGGGTCCCCTGGCTCATACTTAAATGTATTGTTCTCTGTCTTGGCTCAGTGGTACTATTGGCACTTCATATTTTAAACTCTGTGGAACGCTGTCAGGAGAAATAGAACAGAATCCCAACGACATTGTGTTCTAAGGGGTCCTAATGAAGAATTAATTGACGTCTGCCTGAGCTGAATCTGAATTTGAATCGGCCTGAGCTGAGATATCCTAATGACAACAGGAATGTTTGTTTTAAAGTATCTCAGTACGTAGCGTTACATTCCAGATTTATTAGATTTGCCCATCTTGCATCAGTGGATGAATGCCGTCAGATTATTGGTTGATTAGAATAAACCTCCTCAAGGGAGGAGTGAATCAGGGAAAACTATGGCAATGAACCCTGTATCTCTATAATATTCTGTTGTTGTTCAATCTAGACCTGTCGCCACAATTTAATCTGGGGGACTATAAATGTTCATTACATTAACTTCAACATGTTGCAGCTGCACCAAATGAAGTTAATAGACACataacatgtttttttatgataTGGCAAATAAACGTTTTTGGAAAAGTGATAAATGTGTAAAAATTTGATTGGATAATACAGTAGTACTGCGGTTGGGATACAGTACTCTCTGGTTATGCCTTCATCTAATACTGCTTAAATGTACTTACAAATACTGTGTTACATCTCATTATCTtagaatatataaaatatacaaaCATATAAAAATCATTACAGTAAAAATACCAATTTAAAAGACTTAAAGTCTTAAAGTGGCTCAACGATCAAAGTAGAATAACTTTATTTCGCCCCCAGCTCAGCAACATTCAGTTTCAATGTGATAGTCAatactgtagtatagtaacagGTATTTAATGTGTCCGTATACTGGCTTTAaatcctcaggatatgtggtggTTTATAACTATGGAGTAGGCCTAAAGTGAGCTCCTATGCAATTGATGAGTGAAATCCAATAATCCGACAATGTGATCCTGTATCGAAATGTATGTAATGAATCTTACTACACTTAATATAATACAGCAATTATTTTACGCCAGTATTTGTTAGTAAATACCCAGAATATTGAGGTGAATTCATTTCACATCGCTTGTGTTGTTGAAAAATGACTTGGTGTCTCATTCAATGCCTTTACAGCCTAGACTATAGCAACGAACAACATTACATTCACACAAACTGTATAAAAAGCTGCATTGATATGGAGTTTTATCCCTGTTTTGCATTACAATCTTATCCTACAAGGCCATCGTTCTTACAACCCTTGGCTTTTGCTGAGTTGCTTAAGTTACTTCTAATTGTGTGGGCTTTCCTGTTCGGCACAGGACTCAACTGTAATACAGAATTGTCTGCCTCCAATAAAGGCTGTCGGCTTGTATTACAGCAGATAACCTCCCCTTTATTACAGCAGATAACTTCCCCTTCATTACAGCAGGggttttcaaacctctcctcgaGGTCCCCCAGTCGTTCCATGTATTTGATCTATTCCacagctagcacacctgattcaacttgtcaactaaccAGCCTTGAAtaggtgaatcaggtgagttaGTTCTGGGCTACAACTAAATTGTGAAACGCCTGgtggtccccgaggagaggttagAAACCGCCGGCCTGTACGCATCGTCTGATTCGGATCTTCACTGGTCTGTTCTGGTGAATGGAAACTCCATGTGATTCAGTGCACAGCCTCGCTTCCTGAAAAGATATGTATCAGTTCAAACTAATGTCTTCTGATCCCCAGAGTTGAAACACCTGAATCAATGCATGTCCTTTGTTATCGTTTGAGGATCTCCATTGTCTTGGCTAGACTGGAAAGCTTGTTAAGGCTTGACACAGAAGTtgcccctaaccacagatctaagATTTCCTTCCCTACCATCCTAGACTTAACCATCAGGGATTCAACAACATCTTACCTTGGATCAGTTAAGGGTGACTATCTATTTCCCCTGTTATGAATGTTTGACCAGCCCTGATTGGTCGCCTCTTACAGAGTGGGCTCAAGCCATTGGACGGCTCATTCCTGTTCCTATCCTATGACCCCTCAGTCAGAGCCCACCCCTGGTGATACCCACAAGCCCTTGCTGAGCACATTTGAGACGGTGAACCGGGTGTAAAAACTTTAAATGTCCCTTTACTGCCTCTTATAAAAGTAGGAAAAATACTTTATATACAGACGTACACTTACACACTCAGTTCAGACACACTcagttcagacacacacacacacacacacacacacactaagaACAACCACACCAAATAAAACACACTGTGCTCACACACTCTTTACACACGTACTCACACATTCCGATATAATTAGGTATATGCACTTGGTGCTAACAGCGTGAGGAGAGGTATCTGCAGCGTGGGGGGCAGGGTGGCTGCGGggggacagcagcagcagcaaggcATCATGGTCGGTCTGGCGGTGAAGTGCTGGTTTTGCAAGCGTTCCAGAATGTTCCAGAGCGTTCCAGAGTGTTCCAGAGCAGAGACGTGTAGCTATAGAGTTACATATCTgagtagtggaggaggagagctGGCCTGGGACTGGGGCACTGCAAGCCGGTCAGGATGGTGTCTCCTTTACTGAGCACGTCTTCTGGACTTCTTCAC
>TU1303653
ttatatgTTTATTGAAAAAGAGGGTGAGTATCATATCGGTATCATATTGCCCCTTGGTTTATACAAACAGTGAACATACAGAGTTGAATTAAACAATCCCTCGTAGATGAAGGATACTTGTGTCGTAAGCTGCCTCAAAAGAATTGAAGGTTTTAACATGTAATTCACATTGTCTGGGGAGAGCACCCATACAGAACAAATACACTTCTGACAAAACACATTTCCACTTGGGATGTTATTGCTTAATGCAATGATTTATTTGCACATGTGGTCCAAATAACAGATATGATAAGTAAAATGGTAACAGCCATGTTGTTTGGTTTGGTTGTGGATCTAACTGTAGCATGGCATTGAACAGAATGGTTCTCAAACACTTAAATAATCACCAAATTCCCTTCCTTTATGACAAACCTTACAACGATGTGATACAGATACTTAATAACCTCTGGACCAAAACACCTGCACTTAGCTCACAGACTAAGATGCCTGGAGATTTGAATGGACCTGGAGCTCTATTTTGACAGTAGAAAAACAATGGcaacagtaaaacagtatagaaaCCCACATCATTGAGGAATGGCTATATCTGGGAGGGAGGGGCTTGATTGAAAACATGTGTGGGTCCCCTGGCTCATACTTAAATGTATTGTTCTCTGTCTTGGCTCAGTGGTACTATTGGCACTTCATATTTTAAACTCTGTGGAACGCTGTCAGGAGAAATAGAACAGAATCCCAACGACATTGTGTTCTAAGGGGTCCTAATGAAGAATTAATTGACGTCTGCCTGAGCTGAATCTGAATTTGAATCGGCCTGAGCTGAGATATCCTAATGACAACAGGAATGTTTGTTTTAAAGTATCTCAGTACGTAGCGTTACATTCCAGATTTATTAGATTTGCCCATCTTGCATCAGTGGATGAATGCCGTCAGATTATTGGTTGATTAGAATAAACCTCCTCAAGGGAGGAGTGAATCAGGGAAAACTATGGCAATGAACCCTGTATCTCTATAATATTCTGTTGTTGTTCAATCTAGACCTGTCGCCACAATTTAATCTGGGGGACTATAAATGTTCATTACATTAACTTCAACATGTTGCAGCTGCACCAAATGAAGTTAATAGACACataacatgtttttttatgataTGGCAAATAAACGTTTTTGGAAAAGTGATAAATGTGTAAAAATTTGATTGGATAATACAGTAGTACTGCGGTTGGGATACAGTACTCTCTGGTTATGCCTTCATCTAATACTGCTTAAATGTACTTACAAATACTGTGTTACATCTCATTATCTtagaatatataaaatatacaaaCATATAAAAATCATTACAGTAAAAATACCAATTTAAAAGACTTAAAGTCTTAAAGTGGCTCAACGATCAAAGTAGAATAACTTTATTTCGCCCCCAGCTCAGCAACATTCAGTTTCAATGTGATAGTCAatactgtagtatagtaacagGTATTTAATGTGTCCGTATACTGGCTTTAaatcctcaggatatgtggtggTTTATAACTATGGAGTAGGCCTAAAGTGAGCTCCTATGCAATTGATGAGTGAAATCCAATAATCCGACAATGTGATCCTGTATCGAAATGTATGTAATGAATCTTACTACACTTAATATAATACAGCAATTATTTTACGCCAGTATTTGTTAGTAAATACCCAGAATATTGAGGTGAATTCATTTCACATCGCTTGTGTTGTTGAAAAATGACTTGGTGTCTCATTCAATGCCTTTACAGCCTAGACTATAGCAACGAACAACATTACATTCACACAAACTGTATAAAAAGCTGCATTGATATGGAGTTTTATCCCTGTTTTGCATTACAATCTTATCCTACAAGGCCATCGTTCTTACAACCCTTGGCTTTTGCTGAGTTGCTTAAGTTACTTCTAATTGTGTGGGCTTTCCTGTTCGGCACAGGACTCAACTGTAATACAGAATTGTCTGCCTCCAATAAAGGCTGTCGGCTTGTATTACAGCAGATAACCTCCCCTTTATTACAGCAGATAACTTCCCCTTCATTACAGCAGGggttttcaaacctctcctcgaGGTCCCCCAGTCGTTCCATGTATTTGATCTATTCCacagctagcacacctgattcaacttgtcaactaaccAGCCTTGAAtaggtgaatcaggtgagttaGTTCTGGGCTACAACTAAATTGTGAAACGCCTGgtggtccccgaggagaggttagAAACCGCCGGCCTGTACGCATCGTCTGATTCGGATCTTCACTGGTCTGTTCTGGTGAATGGAAACTCCATGTGATTCAGTGCACAGCCTCGCTTCCTGAAAAGATATGTATCAGTTCAAACTAATGTCTTCTGATCCCCAGAGTTGAAACACCTGAATCAATGCATGTCCTTTGTTATCGTTTGAGGATCTCCATTGTCTTGGCTAGACTGGAAAGCTTGTTAAGGCTTGACACAGAAGTtgcccctaaccacagatctaagATTTCCTTCCCTACCATCCTAGACTTAACCATCAGGGATTCAACAACATCTTACCTTGGATCAGTTAAGGGTGACTATCTATTTCCCCTGTTATGAATGTTTGACCAGCCCTGATTGGTCGCCTCTTACAGAGTGGGCTCAAGCCATTGGACGGCTCATTCCTGTTCCTATCCTATGACCCCTCAGTCAGAGCCCACCCCTGGTGATACCCACAAGCCCTTGCTGAGCACATTTGAGACGGTGAACCGGGTGTAAAAACTTTAAATGTCCCTTTACTGCCTCTTATAAAAGTAGGAAAAATACTTTATATACAGACGTACACTTACACACTCAGTTCAGACACACTcagttcagacacacacacacacacacacactaagaACAACCACACCAAATAAAACACACTGTGCTCACACACTCTTTACACACGTACTCACACATTCCGATATAATTAGGTATATGCACTTGGTGCTAACAGCGTGAGGAGAGGTATCTGCAGCGTGGGGGGCAGGGTGGCTGCGGggggacagcagcagcagcaaggcATCATGGTCGGTCTGGCGGTGAAGTGCTGGTTTTGCAAGCGTTCCAGAATGTTCCAGAGCGTTCCAGAGTGTTCCAGAGCAGAGACGTGTAGCTATAGAGTTACATATCTgagtagtggaggaggagagctGGCCTGGGACTGGGGCACTGCAAGCCGGTCAGGATGGTGTCTCCTTTACTGAGCACGTCTTCTGGACTTCTTCACcctggagagacagaaagagaggaataAGACACTGGTTGAAGAGGATTCATGGGTGTAACTTCATTTTTCCGTGTGGCCACTTGACATCACCTGATtaggaacaactctgggccctaATGTCATTTTATGGTAAATACTTAGTACGGTGCTCATAGTTATATTGATGCTATGTTCTGC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1303650 False 3254 TUCP 0.41 2 11797914 11801265
TU1303653 True 3425 TUCP 0.41 2 11797914 11801442
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Neighbor

gene id symbol gene type direction distance location
LOC110487231 LOC106590483 coding upstream 36590 11739404 ~ 11761324 (+)
LOC110485532 tm186 coding upstream 74187 11722201 ~ 11723727 (+)
LOC118938205 NA coding upstream 81939 11714252 ~ 11715975 (+)
LOC110517576 LOC106589789 coding upstream 91644 11696226 ~ 11706270 (+)
LOC110513526 LOC106590442 coding upstream 102596 11613286 ~ 11695318 (+)
LOC118938206 LOC106590181 coding downstream 137455 11938897 ~ 12086998 (+)
mxi1 LOC105012119 coding downstream 312942 12114384 ~ 12156710 (+)
LOC110493322 LOC106564480 coding downstream 411071 12212513 ~ 12218511 (+)
LOC110493427 LOC106590166 coding downstream 420744 12222186 ~ 12247997 (+)
LOC110493428 LOC106564483 coding downstream 458704 12260146 ~ 12332179 (+)
G1143166 NA non-coding upstream 70127 11725340 ~ 11727787 (+)
G1143134 NA non-coding upstream 227442 11567977 ~ 11570472 (+)
G1143120 NA non-coding upstream 245000 11552635 ~ 11552914 (+)
G1143119 NA non-coding upstream 245649 11551768 ~ 11552265 (+)
G1143056 NA non-coding upstream 368473 11427718 ~ 11429441 (+)
G1143237 NA non-coding downstream 62113 11863555 ~ 11863818 (+)
G1143265 NA non-coding downstream 116793 11918235 ~ 11919963 (+)
G1143305 NA non-coding downstream 172411 11973853 ~ 11974362 (+)
G1143274 NA non-coding downstream 261840 12063282 ~ 12063552 (+)
G1143349 NA non-coding downstream 275936 12077378 ~ 12078889 (+)
G1143059 LOC106564453 other upstream 362364 11432738 ~ 11435550 (+)
LOC110485562 LOC106590570 other upstream 579831 11216669 ~ 11273353 (+)
G1142964 NA other upstream 592671 11204895 ~ 11205243 (+)
G1142457 NA other upstream 900941 10895925 ~ 10896973 (+)
G1143255 NA other downstream 106595 11908037 ~ 11908661 (+)
G1143355 NA other downstream 357399 12158841 ~ 12162602 (+)

Expression

G1143104 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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G1143104 Expression in each Bioproject

Bar chart with 18 bars.
G1143104 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network