G1143688


Basic Information

Item Value
gene id G1143688
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 11837392 ~ 11838515 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1304357
GTAAAGTACAGTGTCAATGCTAGGGATCAGAAGTCCCTTATGAACAGTGAAGtccagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattataacagacattatggagtaacagtaccgttataacagacattatggagtaacagaaccattataacagacattatggagtaacagtaCCGTTATagcagacattatggagtaacagtaCCGTTATagcagacattatggagtaacagaaccattataacagacattatggagtaacagtaccgttataacagacattatggagtaacagaaccattataacagacattatggagtaacagtaCCGTTATagcagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattataacagacattatggagtaacagtaccgttataacagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattataacagacatCATGGAGTAACAGTACCgttataacagacattatggagtaacattttatggagtaacagaaccgttataacagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattatagcagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattatagcagacattatggagtaacagtttatggagtaacagaaccattataacagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattataacagacattatggagtaacagaaccattatagcagacattatggagtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1304357 True 938 lncRNA 0.34 2 11837392 11838515

Neighbor

gene id symbol gene type direction distance location
LOC110485539 cxcl12b coding downstream 26129 11797902 ~ 11811263 (-)
LOC118938530 NA coding downstream 100316 11736364 ~ 11737076 (-)
LOC110485542 LOC106564456 coding downstream 104943 11723726 ~ 11732449 (-)
LOC110485529 LOC106589785 coding downstream 115286 11713458 ~ 11722106 (-)
LOC110485537 mcrip2 coding downstream 125057 11706574 ~ 11712341 (-)
LOC110485534 LOC106564462 coding upstream 35466 11873981 ~ 11875822 (-)
LOC110487235 xpnpep1 coding upstream 53658 11892173 ~ 11905783 (-)
LOC110485617 LOC106590349 coding upstream 68387 11906902 ~ 11938426 (-)
LOC110485629 NA coding upstream 520338 12358008 ~ 12366285 (-)
LOC110487266 NA coding upstream 577502 12416017 ~ 12448563 (-)
G1143682 NA non-coding downstream 4987 11831745 ~ 11832405 (-)
G1143657 NA non-coding downstream 63852 11773047 ~ 11773540 (-)
G1143652 NA non-coding downstream 75060 11759602 ~ 11762332 (-)
G1143643 NA non-coding downstream 88139 11746462 ~ 11749253 (-)
G1143729 NA non-coding upstream 94567 11933082 ~ 11933581 (-)
G1143767 NA non-coding upstream 158407 11996922 ~ 11998113 (-)
G1143785 NA non-coding upstream 182615 12021130 ~ 12032311 (-)
G1143791 NA non-coding upstream 190594 12029109 ~ 12030164 (-)
G1143799 NA non-coding upstream 207791 12046306 ~ 12047107 (-)
LOC118938427 LOC106564452 other downstream 343052 11447021 ~ 11494371 (-)
LOC110485554 LOC106590435 other downstream 408027 11425756 ~ 11429422 (-)
G1143449 NA other downstream 555300 11281062 ~ 11282092 (-)
G1143380 NA other downstream 678131 11157886 ~ 11159261 (-)
G1143743 NA other upstream 113080 11951595 ~ 11952568 (-)
G1143771 NA other upstream 204593 12043108 ~ 12081882 (-)
G1144335 LOC106564512 other upstream 776461 12614976 ~ 12615559 (-)
G1144338 NA other upstream 779444 12617959 ~ 12618158 (-)

Expression


Co-expression Network