Gene
RNA
| Item | Value |
|---|---|
| gene id | G1144187 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 12334765 ~ 12334990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1304975 | True | 226 | lncRNA | 0.48 | 1 | 12334765 | 12334990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485617 | LOC106590349 | coding | downstream | 396339 | 11906902 ~ 11938426 (-) |
| LOC110487235 | xpnpep1 | coding | downstream | 428982 | 11892173 ~ 11905783 (-) |
| LOC110485534 | LOC106564462 | coding | downstream | 458943 | 11873981 ~ 11875822 (-) |
| LOC110485539 | cxcl12b | coding | downstream | 523502 | 11797902 ~ 11811263 (-) |
| LOC118938530 | NA | coding | downstream | 597689 | 11736364 ~ 11737076 (-) |
| LOC110485629 | NA | coding | upstream | 23863 | 12358008 ~ 12366285 (-) |
| LOC110487266 | NA | coding | upstream | 81027 | 12416017 ~ 12448563 (-) |
| LOC110485637 | LOC106590256 | coding | upstream | 376694 | 12711684 ~ 12720418 (-) |
| LOC118938209 | LOC106564503 | coding | upstream | 387552 | 12722542 ~ 12744218 (-) |
| LOC110493438 | LOC106564504 | coding | upstream | 419196 | 12754186 ~ 12759727 (-) |
| G1144186 | NA | non-coding | downstream | 1042 | 12333121 ~ 12333723 (-) |
| G1144185 | NA | non-coding | downstream | 3066 | 12330418 ~ 12331699 (-) |
| G1144122 | NA | non-coding | downstream | 64153 | 12209962 ~ 12270612 (-) |
| G1144121 | NA | non-coding | downstream | 126195 | 12208325 ~ 12208570 (-) |
| G1144118 | NA | non-coding | downstream | 133599 | 12200745 ~ 12201166 (-) |
| G1144188 | NA | non-coding | upstream | 344 | 12335334 ~ 12335560 (-) |
| G1144194 | NA | non-coding | upstream | 12802 | 12347792 ~ 12349029 (-) |
| G1144198 | NA | non-coding | upstream | 78384 | 12413374 ~ 12503669 (-) |
| G1144318 | NA | non-coding | upstream | 256491 | 12591481 ~ 12592128 (-) |
| G1143771 | NA | other | downstream | 252883 | 12043108 ~ 12081882 (-) |
| G1143743 | NA | other | downstream | 382197 | 11951595 ~ 11952568 (-) |
| LOC118938427 | LOC106564452 | other | downstream | 840425 | 11447021 ~ 11494371 (-) |
| LOC110485554 | LOC106590435 | other | downstream | 905400 | 11425756 ~ 11429422 (-) |
| G1144335 | LOC106564512 | other | upstream | 279986 | 12614976 ~ 12615559 (-) |
| G1144338 | NA | other | upstream | 282969 | 12617959 ~ 12618158 (-) |
| G1145035 | NA | other | upstream | 789880 | 13124870 ~ 13126598 (-) |
| LOC110485655 | rab3d | other | upstream | 830524 | 13163816 ~ 13178960 (-) |
