G1144318


Basic Information

Item Value
gene id G1144318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 12591481 ~ 12592128 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1305125
ggtactgtatatatacacacaccataaGGGGGCGGTATGATCCAAGTTATAGGCTGCAGTCAGAAAGTCGTCTGAAAAGTAGCCAAGTAATGTAGTACATAAAAGCTTGCATATTCTACCAGACTAATTCCAACATCTGATATTCTTCACCCACTAACAAACATTTGCCAATCATTCGCATAAAGATTATGGGTGTTACATGTTTGATAGAGAAgatacatgagagagagagagagagagagagagagatcatcataATTTCACCATTGAAATAATGCACAGTGTATTATCATAACACACATACAGTTGTAGTGCTCAACTTACAGTGAATCCAACTGTGGTGAGTGAAACATAGTCATATTATTATTTCACAACAcagactagcctggtcccagatctgtttgtgattTTGCCTACTCCATTGCcattgtttgacatgacaattcCATACAGAGTTGGcaagaaacagactggcacccaggctaaaaACAGACAGTTAAACTCTCAGATACCTGACACCAGAATTAGGAAGGAATCCAATATgaaaataaggttaatagaaaaaCAGATGGATAAACGATAACAGCAACAGCAAGTGAACATTTGACATCAAAGAATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1305125 True 622 lncRNA 0.38 2 12591481 12592128

Neighbor

gene id symbol gene type direction distance location
LOC110487266 NA coding downstream 142918 12416017 ~ 12448563 (-)
LOC110485629 NA coding downstream 231151 12358008 ~ 12366285 (-)
LOC110485617 LOC106590349 coding downstream 653055 11906902 ~ 11938426 (-)
LOC110487235 xpnpep1 coding downstream 685698 11892173 ~ 11905783 (-)
LOC110485534 LOC106564462 coding downstream 715659 11873981 ~ 11875822 (-)
LOC110485637 LOC106590256 coding upstream 119556 12711684 ~ 12720418 (-)
LOC118938209 LOC106564503 coding upstream 130414 12722542 ~ 12744218 (-)
LOC110493438 LOC106564504 coding upstream 162058 12754186 ~ 12759727 (-)
LOC110485521 LOC106589832 coding upstream 279757 12871885 ~ 12878585 (-)
LOC110485520 LOC106590222 coding upstream 288820 12880948 ~ 12883307 (-)
G1144198 NA non-coding downstream 87812 12413374 ~ 12503669 (-)
G1144194 NA non-coding downstream 242452 12347792 ~ 12349029 (-)
G1144188 NA non-coding downstream 255921 12335334 ~ 12335560 (-)
G1144187 NA non-coding downstream 256491 12334765 ~ 12334990 (-)
G1144319 NA non-coding upstream 1488 12593616 ~ 12594366 (-)
G1144321 NA non-coding upstream 4712 12596840 ~ 12597109 (-)
G1144322 NA non-coding upstream 5207 12597335 ~ 12597693 (-)
G1144330 NA non-coding upstream 10208 12602336 ~ 12603302 (-)
G1144329 NA non-coding upstream 12960 12605088 ~ 12605301 (-)
G1143771 NA other downstream 509599 12043108 ~ 12081882 (-)
G1143743 NA other downstream 638913 11951595 ~ 11952568 (-)
LOC110485539 cxcl12b other downstream 780250 11797902 ~ 11811263 (-)
LOC118938427 LOC106564452 other downstream 1097141 11447021 ~ 11494371 (-)
G1144335 LOC106564512 other upstream 22848 12614976 ~ 12615559 (-)
G1144338 NA other upstream 25831 12617959 ~ 12618158 (-)
G1145035 NA other upstream 532742 13124870 ~ 13126598 (-)
LOC110485655 rab3d other upstream 573386 13163816 ~ 13178960 (-)
G1145046 LOC106589870 other upstream 700807 13292935 ~ 13294143 (-)

Expression


Co-expression Network