Gene
RNA
| Item | Value |
|---|---|
| gene id | G1144319 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 12593616 ~ 12594366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1305126 | True | 751 | lncRNA | 0.32 | 1 | 12593616 | 12594366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487266 | NA | coding | downstream | 145053 | 12416017 ~ 12448563 (-) |
| LOC110485629 | NA | coding | downstream | 233286 | 12358008 ~ 12366285 (-) |
| LOC110485617 | LOC106590349 | coding | downstream | 655190 | 11906902 ~ 11938426 (-) |
| LOC110487235 | xpnpep1 | coding | downstream | 687833 | 11892173 ~ 11905783 (-) |
| LOC110485534 | LOC106564462 | coding | downstream | 717794 | 11873981 ~ 11875822 (-) |
| LOC110485637 | LOC106590256 | coding | upstream | 117318 | 12711684 ~ 12720418 (-) |
| LOC118938209 | LOC106564503 | coding | upstream | 128176 | 12722542 ~ 12744218 (-) |
| LOC110493438 | LOC106564504 | coding | upstream | 159820 | 12754186 ~ 12759727 (-) |
| LOC110485521 | LOC106589832 | coding | upstream | 277519 | 12871885 ~ 12878585 (-) |
| LOC110485520 | LOC106590222 | coding | upstream | 286582 | 12880948 ~ 12883307 (-) |
| G1144318 | NA | non-coding | downstream | 1488 | 12591481 ~ 12592128 (-) |
| G1144198 | NA | non-coding | downstream | 89947 | 12413374 ~ 12503669 (-) |
| G1144194 | NA | non-coding | downstream | 244587 | 12347792 ~ 12349029 (-) |
| G1144188 | NA | non-coding | downstream | 258056 | 12335334 ~ 12335560 (-) |
| G1144321 | NA | non-coding | upstream | 2474 | 12596840 ~ 12597109 (-) |
| G1144322 | NA | non-coding | upstream | 2969 | 12597335 ~ 12597693 (-) |
| G1144330 | NA | non-coding | upstream | 7970 | 12602336 ~ 12603302 (-) |
| G1144329 | NA | non-coding | upstream | 10722 | 12605088 ~ 12605301 (-) |
| G1144327 | NA | non-coding | upstream | 11009 | 12605375 ~ 12605656 (-) |
| G1143771 | NA | other | downstream | 511734 | 12043108 ~ 12081882 (-) |
| G1143743 | NA | other | downstream | 641048 | 11951595 ~ 11952568 (-) |
| LOC110485539 | cxcl12b | other | downstream | 782385 | 11797902 ~ 11811263 (-) |
| LOC118938427 | LOC106564452 | other | downstream | 1099276 | 11447021 ~ 11494371 (-) |
| G1144335 | LOC106564512 | other | upstream | 20610 | 12614976 ~ 12615559 (-) |
| G1144338 | NA | other | upstream | 23593 | 12617959 ~ 12618158 (-) |
| G1145035 | NA | other | upstream | 530504 | 13124870 ~ 13126598 (-) |
| LOC110485655 | rab3d | other | upstream | 571148 | 13163816 ~ 13178960 (-) |
| G1145046 | LOC106589870 | other | upstream | 698569 | 13292935 ~ 13294143 (-) |
