G1144330


Basic Information

Item Value
gene id G1144330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 12602336 ~ 12603302 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1305137
ATGTATACAGTAACAGATGTATAAGTGATGTATACAGTAACAGATGTATAAGTGCTGTATCCAGTAACAGATGTATAAGTGCTGTATCCAGTAACTGATGTATAGGTGCTGTATCCAGTAACTGCTGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACAGATGTATAAGTGCTGTATCCAGTAACTGCTGTATAAGTGATGTATCCAGTAACTGATGTAT
>TU1305138
ATGTATACAGTAACAGATGTATAAGTGATGTATACAGTAACAGATGTATAAGTGCTGTATCCAGTAACAGATGTATAAGTGCTGTATCCAGTAACTGATGTATAGGTGCTGTATCCAGTAACTGCTGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGAGGTATAAGTGCTGTATCCAGTAGCTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGATGTATCCAGTAACAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACTGATGTATAAGTGCTGTATCCAGTAACAGATGTATAAGTGCTGTATCCAGTAACTGCTGTATAAGTGATGTATCCAGTAACTGATGTAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581004

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1305137 False 346 lncRNA 0.36 2 12602336 12603302
TU1305138 True 433 lncRNA 0.37 2 12602336 12603302

Neighbor

gene id symbol gene type direction distance location
LOC110487266 NA coding downstream 153773 12416017 ~ 12448563 (-)
LOC110485629 NA coding downstream 242006 12358008 ~ 12366285 (-)
LOC110485617 LOC106590349 coding downstream 663910 11906902 ~ 11938426 (-)
LOC110487235 xpnpep1 coding downstream 696553 11892173 ~ 11905783 (-)
LOC110485534 LOC106564462 coding downstream 726514 11873981 ~ 11875822 (-)
LOC110485637 LOC106590256 coding upstream 108382 12711684 ~ 12720418 (-)
LOC118938209 LOC106564503 coding upstream 119240 12722542 ~ 12744218 (-)
LOC110493438 LOC106564504 coding upstream 150884 12754186 ~ 12759727 (-)
LOC110485521 LOC106589832 coding upstream 268583 12871885 ~ 12878585 (-)
LOC110485520 LOC106590222 coding upstream 277646 12880948 ~ 12883307 (-)
G1144322 NA non-coding downstream 4643 12597335 ~ 12597693 (-)
G1144321 NA non-coding downstream 5227 12596840 ~ 12597109 (-)
G1144319 NA non-coding downstream 7970 12593616 ~ 12594366 (-)
G1144318 NA non-coding downstream 10208 12591481 ~ 12592128 (-)
G1144198 NA non-coding downstream 98667 12413374 ~ 12503669 (-)
G1144329 NA non-coding upstream 1786 12605088 ~ 12605301 (-)
G1144327 NA non-coding upstream 2073 12605375 ~ 12605656 (-)
G1144328 NA non-coding upstream 2812 12606114 ~ 12606518 (-)
G1144331 NA non-coding upstream 3677 12606979 ~ 12607362 (-)
G1144332 NA non-coding upstream 5266 12608568 ~ 12609435 (-)
G1143771 NA other downstream 520454 12043108 ~ 12081882 (-)
G1143743 NA other downstream 649768 11951595 ~ 11952568 (-)
LOC110485539 cxcl12b other downstream 791105 11797902 ~ 11811263 (-)
LOC118938427 LOC106564452 other downstream 1107996 11447021 ~ 11494371 (-)
G1144335 LOC106564512 other upstream 11674 12614976 ~ 12615559 (-)
G1144338 NA other upstream 14657 12617959 ~ 12618158 (-)
G1145035 NA other upstream 521568 13124870 ~ 13126598 (-)
LOC110485655 rab3d other upstream 562212 13163816 ~ 13178960 (-)
G1145046 LOC106589870 other upstream 689633 13292935 ~ 13294143 (-)

Expression


Co-expression Network