G1144332


Basic Information

Item Value
gene id G1144332
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 12608568 ~ 12609435 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1305140
gggtaaaacaatgataaaaaagcagacattgaacaaccctttgagcatggtgatgttataaattacactttggatggtgtatcaatacactacaaatatacaggcgtccttcctaactcagttgccggaaaggaaggaaaccgctcaggaaaCTGCTCATgacgccaatggtgactttaaaacagtttaatggctgtgataggagaacacagaggatggatcaacaacattgtagttactccacaaatgtaacctaaatgacagagtggaaagaaggaagcttgtacagaataaaaacagtctaaaacatgcatcctgtttgcaataaggcactaaagtaaaacagcaaaaaatgtggcaaagaaattaactttatgtcccgaatacaaagcattatgtttggggcaaatccaacacaacacatcacagagagatccttgataaaaacctggtccagagcactcaggacctcagactggggcgaaggaacaggataacgaccctaagcacacagccaagactacgcaggagtggcttcagggcaagtctctgaatgtccttgagtggcccagccagagcccagacttgaaccagatcgaacatctctggagagacctgataatagctgtgcagcgaagctccccatccaacctgagagcttgagaagatctgcagagaagaatgggggaaactccccaaatacaggtgtgccaagcttgtagtgtcatacccaagaagacttgaggctgtaattgctgcttcaacaaagtactgagtaaagggtctgaatacatatgcaaatgtgatatttcagtttatttttaatacatttctaaacctgtttttgctttgtcattgaggcattgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1305140 True 868 lncRNA 0.42 1 12608568 12609435

Neighbor

gene id symbol gene type direction distance location
LOC110487266 NA coding downstream 160005 12416017 ~ 12448563 (-)
LOC110485629 NA coding downstream 248238 12358008 ~ 12366285 (-)
LOC110485617 LOC106590349 coding downstream 670142 11906902 ~ 11938426 (-)
LOC110487235 xpnpep1 coding downstream 702785 11892173 ~ 11905783 (-)
LOC110485534 LOC106564462 coding downstream 732746 11873981 ~ 11875822 (-)
LOC110485637 LOC106590256 coding upstream 102249 12711684 ~ 12720418 (-)
LOC118938209 LOC106564503 coding upstream 113107 12722542 ~ 12744218 (-)
LOC110493438 LOC106564504 coding upstream 144751 12754186 ~ 12759727 (-)
LOC110485521 LOC106589832 coding upstream 262450 12871885 ~ 12878585 (-)
LOC110485520 LOC106590222 coding upstream 271513 12880948 ~ 12883307 (-)
G1144331 NA non-coding downstream 1206 12606979 ~ 12607362 (-)
G1144328 NA non-coding downstream 2050 12606114 ~ 12606518 (-)
G1144327 NA non-coding downstream 2912 12605375 ~ 12605656 (-)
G1144329 NA non-coding downstream 3267 12605088 ~ 12605301 (-)
G1144330 NA non-coding downstream 5266 12602336 ~ 12603302 (-)
G1144336 NA non-coding upstream 7231 12616666 ~ 12616885 (-)
G1144337 NA non-coding upstream 7664 12617099 ~ 12617747 (-)
G1144340 NA non-coding upstream 11006 12620441 ~ 12621107 (-)
G1144345 NA non-coding upstream 17233 12626668 ~ 12626869 (-)
G1144349 NA non-coding upstream 23658 12633093 ~ 12633447 (-)
G1143771 NA other downstream 526686 12043108 ~ 12081882 (-)
G1143743 NA other downstream 656000 11951595 ~ 11952568 (-)
LOC110485539 cxcl12b other downstream 797337 11797902 ~ 11811263 (-)
LOC118938427 LOC106564452 other downstream 1114228 11447021 ~ 11494371 (-)
G1144335 LOC106564512 other upstream 5541 12614976 ~ 12615559 (-)
G1144338 NA other upstream 8524 12617959 ~ 12618158 (-)
G1145035 NA other upstream 515435 13124870 ~ 13126598 (-)
LOC110485655 rab3d other upstream 556079 13163816 ~ 13178960 (-)
G1145046 LOC106589870 other upstream 683500 13292935 ~ 13294143 (-)

Expression


Co-expression Network