G1144412


Basic Information

Item Value
gene id G1144412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 12709878 ~ 12710620 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1305237
TAAAGGGTTGtacacagtactgtactgtagtaataATGTAGCAGTATGAGGAGTCAGCTGACAGTACTATACTGGAGTAATACTGTAGCAGTATGAGGAGTCAGCTgacagtactatactgtagtaatactgtagcagtatgaggagtcagctgacagtactatactgtagtaatactgtatcagtatgaggagtcagctgacagtactatactgtagtaatactgtagcagtatgaggagtcagctgacagtactatactgtagtaatactgtagcagtatgaggagtcagctgacagtactatactgtagtaatactgtagcagtatgaggagtcagctgacagtactatactggagtaatactgtagcagtatgaggagtcagctgacagtactatactgtagtaatactgtatcagtatgaggagtcagctgacagtagtatactgtagtaatactgtagcagTATGAGGAGTCAGCTGACAGTACTATACTGCAGTAATACTGTAGCAGTATGAGGAGTCAGCTGACAGTACTATACTGCAGTAATACTGTAGCAGTATGAGGACTCAGCTGACAGTACTATACTGGAGTAATACTGTAGCAGTATGAGGAGTCAGCTGACAGTACTATACTGCAGTAATACTGTAGCAGTATGAGGACTCAGCTCTTTCAACAGGTTGCATACCTTACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1305237 True 696 lncRNA 0.41 2 12709878 12710620

Neighbor

gene id symbol gene type direction distance location
LOC110487266 NA coding downstream 261315 12416017 ~ 12448563 (-)
LOC110485629 NA coding downstream 349548 12358008 ~ 12366285 (-)
LOC110485617 LOC106590349 coding downstream 771452 11906902 ~ 11938426 (-)
LOC110487235 xpnpep1 coding downstream 804095 11892173 ~ 11905783 (-)
LOC110485534 LOC106564462 coding downstream 834056 11873981 ~ 11875822 (-)
LOC110485637 LOC106590256 coding upstream 1064 12711684 ~ 12720418 (-)
LOC118938209 LOC106564503 coding upstream 11922 12722542 ~ 12744218 (-)
LOC110493438 LOC106564504 coding upstream 43566 12754186 ~ 12759727 (-)
LOC110485521 LOC106589832 coding upstream 161265 12871885 ~ 12878585 (-)
LOC110485520 LOC106590222 coding upstream 170328 12880948 ~ 12883307 (-)
G1144401 NA non-coding downstream 10515 12698250 ~ 12699363 (-)
G1144394 NA non-coding downstream 19491 12690179 ~ 12690387 (-)
G1144392 NA non-coding downstream 21888 12687699 ~ 12687990 (-)
G1144390 NA non-coding downstream 25022 12684235 ~ 12684856 (-)
G1144389 NA non-coding downstream 25653 12684015 ~ 12684225 (-)
G1144418 NA non-coding upstream 37707 12748327 ~ 12748610 (-)
G1144425 NA non-coding upstream 55058 12765678 ~ 12767371 (-)
G1144427 NA non-coding upstream 62605 12773225 ~ 12776413 (-)
G1144428 NA non-coding upstream 64351 12774971 ~ 12777529 (-)
G1144338 NA other downstream 91720 12617959 ~ 12618158 (-)
G1144335 LOC106564512 other downstream 94319 12614976 ~ 12615559 (-)
G1143771 NA other downstream 627996 12043108 ~ 12081882 (-)
G1143743 NA other downstream 757310 11951595 ~ 11952568 (-)
G1145035 NA other upstream 414250 13124870 ~ 13126598 (-)
LOC110485655 rab3d other upstream 454894 13163816 ~ 13178960 (-)
G1145046 LOC106589870 other upstream 582315 13292935 ~ 13294143 (-)
G1145110 LOC106589620 other upstream 646454 13357074 ~ 13360808 (-)
LOC110485696 LOC106564559 other upstream 952560 13657453 ~ 13665295 (-)

Expression


Co-expression Network