Gene
RNA
| Item | Value |
|---|---|
| gene id | G1144939 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 12827255 ~ 12827821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1305912 | False | 251 | lncRNA | 0.45 | 2 | 12827255 | 12827821 |
| TU1305913 | True | 232 | lncRNA | 0.44 | 2 | 12827255 | 12827644 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493438 | LOC106564504 | coding | downstream | 67528 | 12754186 ~ 12759727 (-) |
| LOC118938209 | LOC106564503 | coding | downstream | 83037 | 12722542 ~ 12744218 (-) |
| LOC110485637 | LOC106590256 | coding | downstream | 106837 | 12711684 ~ 12720418 (-) |
| LOC110487266 | NA | coding | downstream | 378692 | 12416017 ~ 12448563 (-) |
| LOC110485629 | NA | coding | downstream | 466925 | 12358008 ~ 12366285 (-) |
| LOC110485521 | LOC106589832 | coding | upstream | 44064 | 12871885 ~ 12878585 (-) |
| LOC110485520 | LOC106590222 | coding | upstream | 53127 | 12880948 ~ 12883307 (-) |
| LOC110485643 | LOC106590024 | coding | upstream | 72801 | 12900622 ~ 12904681 (-) |
| LOC110485647 | LOC106589946 | coding | upstream | 80941 | 12908759 ~ 13083882 (-) |
| LOC110487275 | LOC106589720 | coding | upstream | 313922 | 13141743 ~ 13143937 (-) |
| G1144936 | NA | non-coding | downstream | 4830 | 12821663 ~ 12822425 (-) |
| G1144438 | NA | non-coding | downstream | 35057 | 12791935 ~ 12792198 (-) |
| G1144436 | NA | non-coding | downstream | 36112 | 12790768 ~ 12791143 (-) |
| G1144434 | NA | non-coding | downstream | 41439 | 12785611 ~ 12785816 (-) |
| G1144428 | NA | non-coding | downstream | 49726 | 12774971 ~ 12777529 (-) |
| G1144975 | NA | non-coding | upstream | 41372 | 12869193 ~ 12870125 (-) |
| G1144978 | NA | non-coding | upstream | 63455 | 12891276 ~ 12891608 (-) |
| G1144987 | NA | non-coding | upstream | 104766 | 12932587 ~ 12933297 (-) |
| G1144338 | NA | other | downstream | 209097 | 12617959 ~ 12618158 (-) |
| G1144335 | LOC106564512 | other | downstream | 211696 | 12614976 ~ 12615559 (-) |
| G1143771 | NA | other | downstream | 745373 | 12043108 ~ 12081882 (-) |
| G1143743 | NA | other | downstream | 874687 | 11951595 ~ 11952568 (-) |
| G1145035 | NA | other | upstream | 297049 | 13124870 ~ 13126598 (-) |
| LOC110485655 | rab3d | other | upstream | 337693 | 13163816 ~ 13178960 (-) |
| G1145046 | LOC106589870 | other | upstream | 465114 | 13292935 ~ 13294143 (-) |
| G1145110 | LOC106589620 | other | upstream | 529253 | 13357074 ~ 13360808 (-) |
| LOC110485696 | LOC106564559 | other | upstream | 835359 | 13657453 ~ 13665295 (-) |
