G1144975


Basic Information

Item Value
gene id G1144975
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 12869193 ~ 12870125 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1305957
TAACTAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACCAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACCAGGTTTCCATAACCAGGTTTCCATAACTAGGTTTCCATAACCAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACCAGGTTTCCATAACCAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACCAGGTTTCCATAACTAGGTTTCCATAACCAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCATAACTAGGTTTCCataactaggtttccatccactatgcacattttcccaccagtggtgtgtttccaccaaactgacttgttgaggataaaaatcagtgtgtgatgacgtagtgcacaaaaacatgtatttttcggTTAAGGtttcatgtactgaataaaaattGAAAGTTCAACGTGTTTCCTTCGCTTTTTTACCGATAGTTGTGATACAAAAACTGTTGCATTAAATAGCatatgtgcctactctggtcgtGCGCGCCAGCCAACAACAGCTATACAGTGCAGGTAATGCAGGCGGtgcaggtaggctagtctacatgatgagattattatggctAAGAGAGAGAATATTTTgtcaaacagcagtcaagcaccaatcatcatgtcaccagaataagacatTTTTGGAAAGGTGTATCAAGAGGACCACACATCATATCAtcgtgtgactccaagtttacgtcgatatgatggttattatatcaatatttacgcataaaggcatttccaccgccatttcaCGCATAATACACCACCCCttaccctccacccccc

Function

NR:

description
WD repeat-containing protein 87

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1305957 True 905 lncRNA 0.40 2 12869193 12870125

Neighbor

gene id symbol gene type direction distance location
LOC110493438 LOC106564504 coding downstream 109466 12754186 ~ 12759727 (-)
LOC118938209 LOC106564503 coding downstream 124975 12722542 ~ 12744218 (-)
LOC110485637 LOC106590256 coding downstream 148775 12711684 ~ 12720418 (-)
LOC110487266 NA coding downstream 420630 12416017 ~ 12448563 (-)
LOC110485629 NA coding downstream 508863 12358008 ~ 12366285 (-)
LOC110485521 LOC106589832 coding upstream 1760 12871885 ~ 12878585 (-)
LOC110485520 LOC106590222 coding upstream 10823 12880948 ~ 12883307 (-)
LOC110485643 LOC106590024 coding upstream 30497 12900622 ~ 12904681 (-)
LOC110485647 LOC106589946 coding upstream 38637 12908759 ~ 13083882 (-)
LOC110487275 LOC106589720 coding upstream 271618 13141743 ~ 13143937 (-)
G1144939 NA non-coding downstream 41372 12827255 ~ 12827821 (-)
G1144936 NA non-coding downstream 46768 12821663 ~ 12822425 (-)
G1144438 NA non-coding downstream 76995 12791935 ~ 12792198 (-)
G1144436 NA non-coding downstream 78050 12790768 ~ 12791143 (-)
G1144434 NA non-coding downstream 83377 12785611 ~ 12785816 (-)
G1144978 NA non-coding upstream 21151 12891276 ~ 12891608 (-)
G1144987 NA non-coding upstream 62462 12932587 ~ 12933297 (-)
G1145019 NA non-coding upstream 179883 13050008 ~ 13053000 (-)
G1144338 NA other downstream 251035 12617959 ~ 12618158 (-)
G1144335 LOC106564512 other downstream 253634 12614976 ~ 12615559 (-)
G1143771 NA other downstream 787311 12043108 ~ 12081882 (-)
G1143743 NA other downstream 916625 11951595 ~ 11952568 (-)
G1145035 NA other upstream 254745 13124870 ~ 13126598 (-)
LOC110485655 rab3d other upstream 295389 13163816 ~ 13178960 (-)
G1145046 LOC106589870 other upstream 422810 13292935 ~ 13294143 (-)
G1145110 LOC106589620 other upstream 486949 13357074 ~ 13360808 (-)
LOC110485696 LOC106564559 other upstream 793055 13657453 ~ 13665295 (-)

Expression


Co-expression Network